Triticum aestivum (bread wheat): 123123265
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Entry
123123265 CDS
T07757
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123123265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
taes04131
]
123123265
Membrane trafficking [BR:
taes04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
123123265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
DUF5752
Motif
Other DBs
NCBI-GeneID:
123123265
NCBI-ProteinID:
XP_044399677
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Position
5D:505291527..505300338
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AA seq
816 aa
AA seq
DB search
MLPDGGGDDEERWLAEGIAGVQQNAFYMHRALDSNNLKDALKYSAQMLSELRTSRLSPHK
YYELYMRAFDEMRKLEMFFREETRRGSCSVVDLYELVQHAGNVLPRLYLLCTVGSVYIKS
KEAPAKDVLKDLVEMCRGIQHPLRGLFLRSYLSQISRDKLPDIGSEYEGDADSINDAVEF
VLQNFIEMNKLWVRMQHQGPVREKDKRGKERNELRDLVGKNLHVLSQIEGVDLEMYKENV
LPRISEQVVNCKDDLAQFYLMDCIIQVFPDEYHLQTLETLLSAFPQLQPSVDIKTVLSQL
MDRLSNYAATSPEVLPEFLQVEAFAKFSNAIGKVIEAQVDMPVVGAVTLYVSLLTFTLRV
HPDRLDYVDQVLGACVKKLSGKEKLEDSRATKQIVALLSAPLEKYSNIVTALELSNYPRV
MDYLDNATTKVMALVIIQSIMKNTTCISTSDKIEALFDLIKGLIKDMDGAQDDELDEEDF
KEEQNSVARLIHMLHNDDHDEMLKILCTVQKHILQGGPKRLPFTVPSLVFSALKLVRRLQ
GQDGDVTGEEVPATPKKIFQILHQTIEALQCIPCPELSLRLYLQCAEVFLAQLIDSFYTS
SYCVTAFLIQAANDCDLEPVAYEFFTQAFILYEEEIADSKAQITALHLIIGTLQRMNIFG
VENRDTLTHKTTGYSAKLLKKPDQCRAVYACSHLFWTDDQDGIMDGERVLLCLKRALRIA
NAAQQMANVSKGSSGSVILFIEILNKYLYFFEKGIPQITNTVIQDLIELIRTEKQNDSSA
SDPSAEAFFASTLRYIAFQKQKGGSIGEKYEQIKAS
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccgacggcggcggcgacgacgaggagcgctggctcgccgagggcatcgccggc
gtccagcagaacgccttctacatgcaccgcgccctcgactcgaacaacctcaaggacgcg
ctcaagtactcggcgcagatgctctcggagctgcgcacctccaggctctccccgcacaag
tactacgagctatacatgagggcgttcgacgagatgcggaagctggagatgttcttcagg
gaggagacccgccgggggagctgctccgtggttgatctctacgagcttgttcagcatgct
ggcaacgtattgccgagactttatctgctctgcacagtaggatctgtgtacattaaatcg
aaagaggctcccgctaaagatgttctgaaagaccttgttgaaatgtgtcgaggcattcaa
catcctcttcgtggacttttcctaagaagttacctctctcagataagccgagacaagcta
cctgatattggttcagagtatgaaggggatgctgatagcattaatgatgcagttgaattt
gttcttcagaatttcatagaaatgaacaaactctgggtccggatgcagcatcaggggcct
gttcgggagaaggacaagcgggggaaggaaagaaatgaactgcgtgatctggtaggcaaa
aaccttcacgttctaagccaaatcgaaggcgttgaccttgaaatgtacaaagagaatgtt
cttccaaggatatcagaacaggtagttaattgtaaggacgatcttgcacagttctacctg
atggactgcataatccaagtctttccagatgaataccatctacagacattggaaacattg
ttgagcgcatttccccagctacagccaagtgttgatatcaaaacggtgctatctcaactc
atggacagattgtcaaactatgctgccacaagtcctgaagtactgccggagtttttgcaa
gttgaagcttttgcgaagttcagcaatgctattggaaaggtgatagaagctcaagttgac
atgccggttgttggagcagtaactttatatgtatcactcctcacatttactctccgtgtg
catccagatcggcttgattatgttgaccaagtgctgggtgcatgcgtgaagaaactttct
ggcaaggaaaaacttgaagatagcagagcaacaaagcaaattgttgcacttcttagtgct
cccctggagaaatatagtaatattgttactgcattggagctttcaaattatccccgggtt
atggattatctggataatgctacaacgaaagtgatggctctggtaataattcaaagcata
atgaagaacacaacctgcatatctacttccgacaagatcgaggctctttttgatttgatt
aagggccttataaaagatatggatggggctcaagatgacgagcttgatgaagaggatttt
aaggaggagcagaattctgtagcacgccttattcacatgttgcacaatgatgatcacgac
gagatgttgaagatcttatgtactgttcagaagcatatacttcagggaggtcccaagcgt
ctacctttcactgtgccgtccttagtattctccgctctcaagttggtcagacgattacaa
ggtcaagatggagatgtcactggggaggaagttcccgcaactcctaagaagatatttcag
atcttgcatcagaccattgaagcactccaatgtattccttgcccagaattgtctctcaga
ctatatctacaatgcgcagaggtattcttggcgcaactgattgattctttttacacttct
tcctattgtgtgacagcatttcttattcaggctgccaatgattgtgatttggaaccggtt
gcttatgagttctttactcaagcattcatcttatatgaagaagaaatagcggattctaag
gctcaaattactgcacttcacctaataattggaacccttcagcggatgaatatatttggg
gtggaaaatagagacaccctcactcataagacaacagggtactcagcaaaacttctaaag
aagcctgatcaatgccgggcagtctatgcatgttcgcaccttttctggactgatgaccaa
gatggaatcatggatggtgaaagggtcctcctttgcttaaagcgtgccttgagaattgca
aatgctgctcaacaaatggccaatgtatcaaagggaagcagcggatctgtcattctattc
attgaaattttgaacaagtatctgtacttctttgagaaaggaattccacaaatcacgaac
actgtcatccaagatttgatcgaactgatcaggacagagaagcaaaatgacagcagtgca
tctgatccatctgccgaagctttctttgcaagcactctacgatacatcgcattccagaag
cagaaaggtggaagcataggagaaaagtatgaacagataaaagcttcgtaa
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