Triticum aestivum (bread wheat): 123123327
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Entry
123123327 CDS
T07757
Name
(RefSeq) squalene synthase 8-like isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes00100
Steroid biosynthesis
taes00909
Sesquiterpenoid and triterpenoid biosynthesis
taes01100
Metabolic pathways
taes01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
123123327
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
123123327
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
taes01006
]
123123327
Enzymes [BR:
taes01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
123123327
Prenyltransferases [BR:
taes01006
]
Terpene biosynthesis
Squalene/phytoene synthase
123123327
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
123123327
NCBI-ProteinID:
XP_044399750
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Position
5D:511166100..511172048
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AA seq
442 aa
AA seq
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MGVLSRPEEVPALLRLKLAAGRIRRQIPPQDHWAFAYDMLQRVSRSFALVIQQLGPDLRN
AVSTPPSPFPFPSGSPPIRIPEISETFTAADVALVLTLQVCVFYLVLRALDTVEDDTAIP
NEVKLPILRDFYRHIYNPDWLFSCGANDYRVLMDNFRQVSTAFLELGEGYQKAIEEITRR
MGEGMAKFICTEVETIDDYDEYCHYVAGLVGYGLSRLFHATGTEDLAPDHLSNSMGLFLQ
KTNIIRDYLEDINEIPRCRMFWPREIWSKYVDKLEDLKYEENSEKAVQCLNDMVTNALIH
AQDCLQYMSALKDNSNFRFCAIPQIMAIGTCAICYNNVKVFRGVVKMRRGLTARIIDETK
SISDVYSAFYEFSSLLESKIDDNDPNAALTRRRVDAIKKTCKSSGLLKRRGYDLEKSMYR
MPMLIMIALLLVAIILGVLYGK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgctgtcgcggccggaggaggtgccggcgctgctcaggctcaagctggcggcg
gggcggatcaggcgccagatccccccccaggaccactgggccttcgcctacgacatgctc
cagcgggtctcccgcagcttcgcgctcgtcatccagcagctcggaccagacctccgcaat
gccgtaagcacgcccccttcccccttccccttcccctccggatcccctccgatccgaatc
cctgaaatctctgaaacatttacggccgctgatgttgctctggttctgaccctgcaggtg
tgcgtcttctacctcgtgctccgggccctggacaccgtcgaggacgacaccgccatccct
aacgaggtcaagctgcccatccttcgggacttctaccgccacatctacaacccggactgg
ctcttttcatgtggagcaaacgactacagagtgctcatggataattttagacaagtctcc
acggctttcttggagctaggcgaaggataccaaaaggctattgaagaaatcactaggcga
atgggagaaggaatggctaaatttatatgcacggaggttgaaaccattgatgactatgat
gagtactgccactatgtagcagggctagtaggctatggactttctaggctctttcatgct
actggcacagaagatctggctccggatcatctttcaaattcaatgggtttgtttctacag
aaaaccaatataataagggattatttggaggacataaatgagataccaaggtgccgtatg
ttctggcctcgggaaatatggagtaaatatgttgataaacttgaggatttaaaatatgag
gaaaattcagaaaaggccgtgcagtgcttgaatgatatggtaaccaatgctttgatccat
gcccaagattgccttcaatacatgtcagcattgaaggacaattccaattttcgattttgt
gcaatacctcagataatggcaattgggacctgtgctatttgctacaataatgtgaaagtc
tttagaggagttgttaagatgaggcgtgggctcactgcacggataattgatgagacaaaa
tcgatatcagatgtctattctgctttctacgagttctcttcattgctagagtcgaagatt
gatgataacgacccaaatgctgcgctgacacggaggcgtgtggatgcaataaagaaaact
tgcaagtcatccggcctgctgaagcgaaggggttacgatctggagaaatcaatgtacaga
atgcctatgctgatcatgatcgcgcttcttctggtggctattatcttgggtgtactgtat
ggcaagtga
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