Triticum aestivum (bread wheat): 123125419
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Entry
123125419 CDS
T07757
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123125419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123125419
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
123125419
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
123125419
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Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
CHASE5
Motif
Other DBs
NCBI-GeneID:
123125419
NCBI-ProteinID:
XP_044401849
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All DBs
Position
5D:445419600..445422361
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AA seq
200 aa
AA seq
DB search
MAATAMEHDGGAEVVVTPGELLGPSSSLEAGRGAYADGRSVRASVTGRRRFVAPAPGSSD
QRSTVEVVGHKAHGAVPQPGSIVIARVTKVMARMASADIMCVDSKAVKEKFTGMIRQQDV
RATEIDKVDMYQSYRPGDIVRALVLSLGDARAYYLSTAKNELGVVSAQSIAGGTLVPTSW
TEMQCELTGQIEQRKVAKVE
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacggcgatggagcacgacggcggcgccgaggtggtggtcaccccgggggag
ctcctcgggccctcctcgtccctcgaggccgggcgcggcgcctacgccgacggccgctcc
gtgcgcgcgtcggtcaccggccgccgccgcttcgtggcccccgcccccggctcctccgac
cagaggtccacggtggaggtggtcgggcacaaggcgcacggagccgtgcctcagccgggg
agcatcgtcattgcccgtgtgactaaggttatggctaggatggcttctgcagatataatg
tgtgttgactcaaaggctgtcaaggaaaagttcactggcatgataaggcagcaagatgtt
cgtgcaactgagattgacaaggtggatatgtaccagtcctatcgacctggcgacattgtc
agagctctggttctctctcttggtgatgcaagggcatactacctttcgactgccaagaat
gaacttggagttgtttctgcccaaagtatagctggtggtacgctggtcccaaccagttgg
actgagatgcaatgtgaattgactggccaaattgagcaaaggaaagttgcaaaggtggaa
tag
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integrated database retrieval system
