Triticum aestivum (bread wheat): 123127312
Help
Entry
123127312 CDS
T07757
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes00040
Pentose and glucuronate interconversions
taes01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123127312
Enzymes [BR:
taes01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
123127312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
123127312
NCBI-ProteinID:
XP_044402896
LinkDB
All DBs
Position
6A:218108758..218110785
Genome browser
AA seq
427 aa
AA seq
DB search
MSMDRSLQWSRPASLLLLGAAFLAAAAAVTSANPAYNPDPYSVVDHFNRAVHRSTSPRRA
LSSDKSKKAKYTGPCMATNPIDRCWRCRKDWATDRQRMARCAKGFGRETTGGLKGKIYTV
TDPNDDDFTNPRPGSLRWGVVQTEPLWIIFARDMVINASQEIIIQSDKTIDGRGAQVHVA
NGGGLTVQHQNNVIINNLHVHGIKHTDGGNVSMTATHSTIRTRADGDGVSIFNATKVWVD
HLSMDNCEDGMVDVVAMSTAVTISNTHLAHHNDVMLFGADDKKPEDKVMQVTVAFNHFGR
GLVQRMPRCRYGFFHVVNNDYTNWLMYAIGGSSAPTILSQGNRYRAPPNMAAKEVTKRDY
APESEWKNWVWISDGDLMINDAYFTTSGGQIGQKLNGKDLIKPKPGEYVRRLTRFAGPLD
CNPGSPC
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtccatggatcggagcctccaatggagcaggccggcgtcgctgctcctcttgggggcg
gcgttcctggcggcggcggcggccgtaacgagcgccaacccggcgtacaaccccgacccc
tatagcgtggtcgaccacttcaaccgcgccgtccacaggtcgactagcccgcgtcgtgcg
ctgtcgtcggacaagtcgaagaaggcaaagtacacgggcccgtgcatggcgacgaacccg
atcgaccggtgctggcgctgccgcaaggactgggcgacggaccggcagcggatggcccgc
tgcgccaaggggttcggccgcgagaccaccggcggcctcaagggcaagatctacaccgtg
accgaccccaacgacgatgacttcaccaacccgcggcccgggtcgctccggtggggcgtg
gtccagacggagccgctgtggatcatcttcgccagggacatggtgatcaacgcctcccag
gagatcatcatccagagcgacaagaccatcgacgggcgcggggcgcaggtgcacgtggcc
aacggcggcgggctcaccgtccagcaccagaacaacgtcatcatcaacaacctccacgtg
cacggcatcaagcacacggacggcggcaacgtgtcgatgacggcaacccactccaccatc
cgcacccgcgccgacggcgacggcgtctccatcttcaacgccaccaaagtgtgggtggac
cacctctccatggataattgcgaggacggcatggttgacgtggtggccatgtccacggcc
gtcaccatctccaacacccacctggcccaccacaacgacgtgatgctcttcggcgccgac
gacaagaagccggaggacaaggtgatgcaggtcaccgtcgccttcaaccacttcgggaga
ggcctggtgcagaggatgcctcgctgccgctacggcttcttccacgtcgtcaacaacgac
tacaccaactggctcatgtacgccatcggaggcagcagcgcgcccaccatcctcagccag
gggaaccgctacagagcaccacccaacatggctgccaaggaggtgaccaagcgcgactac
gcgcccgagtccgagtggaagaactgggtgtggatatcggacggcgacctgatgataaac
gacgcctacttcaccacgtccggcggacaaattggccagaagctcaacggtaaggacctc
atcaagcccaagccaggggagtacgtcaggaggctcacccgcttcgccggcccgctggac
tgcaacccgggcagtccctgctga
DBGET
integrated database retrieval system
