Triticum aestivum (bread wheat): 123128602
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Entry
123128602 CDS
T07757
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03030
DNA replication
taes03420
Nucleotide excision repair
taes03430
Mismatch repair
taes03440
Homologous recombination
taes03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123128602
03420 Nucleotide excision repair
123128602
03430 Mismatch repair
123128602
03440 Homologous recombination
123128602
03460 Fanconi anemia pathway
123128602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
taes03000
]
123128602
03032 DNA replication proteins [BR:
taes03032
]
123128602
03400 DNA repair and recombination proteins [BR:
taes03400
]
123128602
Transcription factors [BR:
taes03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
123128602
DNA replication proteins [BR:
taes03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
123128602
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
123128602
MMR (mismatch excision repair)
123128602
DSBR (double strand breaks repair)
HR (homologous recombination)
123128602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
CDC24_OB3
Motif
Other DBs
NCBI-GeneID:
123128602
NCBI-ProteinID:
XP_044404578
LinkDB
All DBs
Position
6A:complement(571275173..571278782)
Genome browser
AA seq
654 aa
AA seq
DB search
MASARLTPNGVGAALAGETNLRPIVQVVNLRCVNVDGKGTPRSDRWRGLVSDGAETCPAM
FAGQLSDLARSGLIRRGSVVQLDEYVINMVGGRRVIVVLNLTVLLAECDIIGNPVITPES
ESSNQNNPRVEQFNGTRQYGLAAGNPSPTRPNGNVPVFQPSVSGSSLNTPTRLSDKSPVF
QPTAQPSYRPAPSYKNQGAIAKNEAPARIIPISSLNPYQGRWAIKGRVTAKGDIRRYHNA
KGEGKVFNFDLLDSDGGEIRVACFNTQLDRFYEVVEVGKVYVVSRGNLKPVQRNYNHLNS
EWEITLERDSSVDLCPDENSSIPSQQFNFRPISEIEDTPTGTILDIIGVAISVSPSTTVQ
KKNGTETLKRMIGLKDMSGRSVDLTMWGDFCNREGSQLQEMVERGVFPVLGVKTGRVNDF
NGKCVGTISSSQLLIDPDLSEAHTLRQWFDGGGRDASTQSISRDHTPSASRNEVRMTVAK
IKDDGLGMGDKPDWVTVKASIIFFKSDNFCYTACPTKEGDRQCNKKVTKGTSGLWVCDKC
DKEFPECDYRYLLQLQIQDHSGTTWVTAFQETAQELLGCSALELVTYKENGDPRFAETML
SCLFMDYLLRLKVKEETYSDERRVKNTLVKVERFDPAAESRYLLDLLSRSVASY
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcgaggctgaccccgaacggcgtgggggcggcgctggcgggggagacgaac
ctcaggcccatcgtgcaggtcgtcaacctgcgctgcgtcaacgtcgacggcaagggcacg
ccccggagcgacaggtggcgcggcctcgtctccgacggcgccgagacctgccccgcgatg
ttcgccggccagctcagcgacctcgcgcgctccgggctcatccgccgcggctccgtcgtg
cagctcgacgagtacgtcatcaacatggtcggcggcagaagggttatcgtcgttctgaat
ttgacagttcttctcgcggagtgtgacatcattggcaatccagtgattactccagaaagt
gaatcttctaatcaaaacaacccaagagtggagcaatttaacggaacacgtcaatatggt
ttggcggcaggaaacccaagtcccacaaggcccaatggcaatgttccagtcttccaacct
tcggtgtcagggagctccttgaacacacccaccaggctcagtgacaaatctccagttttc
cagccaacagcacagccatcttatcgtcctgcacccagttacaaaaatcaaggagcaatt
gcgaaaaatgaagcccctgctagaataatccccatatcttctttaaatccttatcagggc
cgctgggctatcaagggtagagttactgcaaagggagacatccgccggtaccacaatgca
aaaggtgaaggcaaagtgttcaactttgacttgcttgattctgatgggggtgagatacgg
gtggcatgtttcaacactcaacttgatcgcttctatgaagttgtggaagttggtaaggtc
tatgtggtatcaagaggaaacttgaaacctgtacagaggaactataaccatctgaacagt
gagtgggagattacgttggagagagattcatcagtggatctttgtcctgatgagaacagc
tcaattccctctcagcagtttaacttcagaccgatcagtgaaattgaggatactccgacc
ggtactatacttgatatcataggtgttgctatctctgtcagcccttccaccacagtacag
aagaaaaatggcacggaaactctgaaaagaatgattggcctgaaggatatgtctggtcga
agtgttgatctaaccatgtggggtgacttttgcaacagagaaggctcacagctgcaagaa
atggttgaacgtggggtcttccccgtgctgggtgtcaaaacaggaagagtgaatgatttc
aatggcaagtgtgtcggcacaatttcttcctctcaactcctcatagaccctgatctctct
gaagctcatactctgaggcaatggttcgacggtggaggaagggatgcttctactcagtcc
atatctagggatcacactccttcagcatcaaggaacgaggtccgaatgacagttgctaaa
atcaaggatgatggtcttggaatgggagacaaacctgattgggttactgtgaaagcctcc
attatattcttcaagagcgacaacttctgctacacagcttgccctactaaggaaggtgac
cggcagtgcaataagaaagtgacaaaggggacctctggcttgtgggtgtgtgacaaatgc
gacaaggagtttccagagtgcgactacaggtatcttctgcagcttcagattcaagatcac
tcgggaacaacttgggtgacagcgtttcaggagaccgcgcaagagttactaggctgctcg
gcgctagaactcgttacatacaaagagaacggagaccctcgttttgcagagaccatgctc
agctgtttgttcatggattatctgctcaggctgaaagtcaaagaagaaacgtacagcgac
gagaggagagtgaagaacacattggtcaaagtggagaggtttgatcctgctgccgaaagt
agatatctgctcgatttactttcaaggtcggtggcatcatattga
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