Triticum aestivum (bread wheat): 123129193
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Entry
123129193 CDS
T07757
Name
(RefSeq) eukaryotic initiation factor 4A-III homolog B-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03013
Nucleocytoplasmic transport
taes03015
mRNA surveillance pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123129193
09122 Translation
03013 Nucleocytoplasmic transport
123129193
03015 mRNA surveillance pathway
123129193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123129193
03041 Spliceosome [BR:
taes03041
]
123129193
03009 Ribosome biogenesis [BR:
taes03009
]
123129193
03012 Translation factors [BR:
taes03012
]
123129193
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123129193
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123129193
mRNA cycle factors
Stress granule specific factors
123129193
Spliceosome [BR:
taes03041
]
Complex C
Other components
EJC/TREX
123129193
Ribosome biogenesis [BR:
taes03009
]
Eukaryotic type
90S particles
Helicases
123129193
Translation factors [BR:
taes03012
]
Eukaryotic type
Initiation factors
eIF-4
123129193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
Cas3-like_C_2
AAA
Helicase_RecD
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
123129193
NCBI-ProteinID:
XP_044405368
UniProt:
A0A3B6NYF7
LinkDB
All DBs
Position
6A:619759000..619763706
Genome browser
AA seq
413 aa
AA seq
DB search
MAAAAGGATTSTRRGPGGGGRPMDDENLTFETSAGVEVVGSFDAMGIREDLLRGIYGYGF
EKPSAIQQRAVIPIITGRDVIAQAQSGTGKTSMISLSVCQVIETNVHEVQALILSPTREL
ATQTERVMQAVGNFMSVSVHACVGGKSIGEDIRKLESGVHVVSGTPGRVCDMIKRRTLRT
RAIKLLVLDEADEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHDILEITSKFMTDPVR
ILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMR
TNNFTVSAMHGDMPQKERDAIMSEFRGGMTRVLITTDVWARGLDVQQVSLVINYDLPNNR
ELYIHRIGRSGRFGRKGVAINFVRKDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcgggcggcgcgacgacgtcgacgaggcgcgggccgggcggcgggggc
cggccgatggacgacgagaacctgaccttcgagacctcggcgggggtggaggtggtgggc
agcttcgacgccatggggatccgcgaggacctgctccgcggcatctacggctacggcttc
gagaagccctccgccatccagcagcgggccgtcatccccatcatcaccggccgcgacgtc
atcgcgcaggcccagtccggcaccggcaagacctccatgatctccctctccgtctgccag
gtcatcgagaccaacgtccacgaggtgcaggcgctgatactgtcgccaactagggaactt
gcgacgcaaacagagagggtgatgcaggctgttggtaacttcatgagcgtctctgtgcat
gcctgtgttggtggcaaaagtatcggcgaggacattaggaagctcgagtctggagtgcat
gttgtttcaggaaccccgggcagagtgtgcgatatgatcaagagaaggaccttgcgcaca
agagccatcaagctcctagtcctggacgaagccgatgagatgttgagcagaggtttcaag
gatcagatatatgatgtctacagatatcttcccccggaacttcaggttgttttgatctct
gcaactctgccccatgacatcttggagataactagcaagttcatgactgatccagtcagg
atccttgtaaaacgtgatgagttgaccctagagggcatcaaacaattctttgttgctgtt
gagaaagaggaatggaagtttgatacactatgtgatctttatgatacacttaccatcacc
caagctgtcattttctgcaacactaagagaaaggtggattggcttactgaaaggatgcgc
accaacaacttcacagtgtcagctatgcacggtgacatgcctcagaaggaaagggatgcg
atcatgagtgagttcaggggtggcatgacccgtgttctgatcacaaccgatgtttgggct
cgagggctggatgtccagcaggtctctcttgtcattaattacgatctccccaacaaccgt
gagctttacatccatcgtattggtcgctctgggcgtttcgggcgcaagggtgtggcgatc
aactttgtgcgcaaggacgacatccgtatccttcgggacatcgagcagtactacagcacg
cagatcgacgagatgcccatgaacgtcgccgatcttatttga
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