Triticum aestivum (bread wheat): 123129525
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Entry
123129525 CDS
T07757
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123129525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123129525
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
123129525
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
123129525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
123129525
NCBI-ProteinID:
XP_044405593
LinkDB
All DBs
Position
6A:111975277..111981017
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AA seq
311 aa
AA seq
DB search
MGDLRLRLNQTQRVRLEAALHELQILAAAAAAAVTFADNIPVNPEDTILKGHGTSDQDGE
VVATVCGVVERVQNLVCVRTLRARYKPQKGDIVIGRVSEIASKRWRLEINFSQGAVLMLS
SMNLPDGIQRRRTDVDELNMQSILEAEVRHIQHDGSLDLQPRSQKYGKLQRGQLLTVPAY
LVKRRKQHFHHLEQYDADLILGCNGFIWVGEHVAVDEGTNLNEDQHKLSMEVEAFTPLET
RRHICRLANAVRVLSALGFTLTVELIIQTAEASLSSHVEISDMLGAEFYVQTAEREAKRR
ADLSRRMNGPR
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgggagacctccgcctccgactaaaccagacacagagggtccgtctcgaggccgcactc
cacgagctccagatcctcgccgccgccgccgccgccgccgtcaccttcgcggacaacatc
cccgtcaaccccgaggacaccatcctcaaggggcatggcacgtctgatcaggatggggag
gttgtggcgacggtgtgcggcgtggtggagcgggtccaaaatctcgtctgcgtgaggacg
ctccgggcaaggtataagccacagaaaggggatatcgttattggccgtgtcagtgagatt
gcttctaagcgctggaggttggagataaactttagccaaggtgctgttttgatgctttct
tctatgaatttgcctgatggaatccagagacggagaactgatgttgatgagcttaatatg
cagagtatacttgaagctgaagttcgtcatatccaacatgatggatctcttgacctacag
ccaaggagtcaaaaatatggaaagcttcagaggggtcaattgctcacagtacctgcctat
ttggtaaaacggcgaaaacagcatttccatcatcttgagcaatatgatgccgatttgatt
ctcggttgcaatggattcatctgggtcggcgagcatgtcgcggtggatgaagggactaat
ttgaatgaagatcaacataagttgagcatggaagtggaggcttttaccccactagaaact
agaaggcacatttgccggcttgccaatgccgtgcgcgtgctttcagcccttggattcact
ctgaccgtcgaactgataatccagaccgctgaagcaagtctatcatcacacgtcgagata
agcgacatgctcggagctgaattttatgtccagacagcggagagagaggccaagcgtcga
gccgatctctcgagaaggatgaatgggccaaggtaa
DBGET
integrated database retrieval system
