Triticum aestivum (bread wheat): 123131031
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Entry
123131031 CDS
T07757
Name
(RefSeq) carbon catabolite repressor protein 4 homolog 4-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123131031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123131031
Enzymes [BR:
taes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
123131031
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123131031
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123131031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
123131031
NCBI-ProteinID:
XP_044406742
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All DBs
Position
1B:complement(454694091..454701176)
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AA seq
396 aa
AA seq
DB search
MLLKPQAIWAASLPLFLGRRLLPKSSPSTPHSGRRLPLRPICKRRMSAQAEPRFAPLPTA
QSEPDAGADGYQFRLVSYNILAQVYVKSAFFPHSPSASLKWKARSKAVLTELKSFNADLM
CIQELDEYETFYRKNMESSGYSSIYVQRSGDKRDGCGIFYKPKSVELLQKEVIHYNDLVE
TCHLNDNVISAPSNNSSPSEESSGKEDNKKRGDPNDPRVRLKRDCVGLLAAFKLGDPCEH
ILIVANTHIYWDPEWIDVKLAQAKYLLSKVSEFEKIIANKFTCKPSVIIAGDFNSTPGDK
VYNYLLSASAESTDEALVKLRSLYAENGGEPEFTNCTPGFTGTLDYIFLSDGGSIKPSSL
LRIPRGGSPDVEGGLPNFHHPSDHLPIGADFQVLSS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgctcctaaaaccccaggcaatctgggcggcttccctccctctcttcctcggccgccgc
ctcctccccaaatccagcccttctactcctcactccggccgccgccttcccctccgcccg
atttgcaagcggcggatgagcgcgcaggcggagcccaggttcgcccctctccccacagcg
cagtccgaacctgatgccggggcagacgggtaccagttccggctggtttcctacaacata
ctcgcccaggtttatgtgaagagcgcgttttttcctcattctccatccgcgtctcttaag
tggaaagctcgttcaaaagccgttctaacagaactcaagagttttaatgctgacctcatg
tgcatacaggagttggatgaatatgagacattctataggaaaaacatggaaagttctgga
tattcaagtatttatgtccagcgatctggggacaaacgagatggatgtggtatattttat
aaaccaaaaagtgtggaactgttacagaaggaagtaatacattacaatgatttggtggaa
acatgtcatcttaatgataatgtaattagtgctccctcgaataattcttcaccatcagaa
gaatctagtggaaaggaagataataagaaacgtggagatccaaatgatccacgtgtgaga
ttgaagcgtgactgtgttggtttactcgctgctttcaagcttggcgatccttgtgagcat
attctaattgtggcgaacacacatatttattgggatccagaatggattgatgtgaagttg
gctcaagcaaagtatcttctttcaaaagtctctgagtttgagaaaattatcgcaaataag
ttcacctgtaaaccttctgtgatcattgctggtgattttaactccacccctggtgataag
gtatacaattaccttttatcagctagcgccgaatctacggacgaagccctggtcaaattg
cgcagcctgtatgctgagaacggaggggagccggagttcacaaattgcactccaggtttt
actggaacgctggactacatattcttgtcagacggcggttcaataaaacctagtagccta
cttcggatcccgcgagggggttccccggatgtggaaggaggcctgcccaacttccaccat
cctagtgatcacttgccaatcggtgccgatttccaggtacttagcagctag
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