Triticum aestivum (bread wheat): 123131067
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Entry
123131067 CDS
T07757
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123131067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123131067
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123131067
Spliceosome [BR:
taes03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
123131067
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_22
AAA_30
AAA_19
SRP54
nSTAND3
T2SSE
nSTAND_NTPase5
AAA_16
Flavi_DEAD
PhoH
hNIFK_binding
Motif
Other DBs
NCBI-GeneID:
123131067
NCBI-ProteinID:
XP_044406769
UniProt:
A0A3B5YYJ0
LinkDB
All DBs
Position
1B:complement(455338786..455342350)
Genome browser
AA seq
1060 aa
AA seq
DB search
MASEEGQLKTRVSDRLMALLGYSEVMVVRLVLRLARDSASAADLAARLVDLAGLPSSADT
VAFAEDVHAMFPRKGSRVSEYRKQVQEAAAFAKRQSALKLLDDEDDVAEDAGATTTAWSS
NSNIKKRFRQKAASQGDDDGEEEATVMRDSGRKVRARRAPATDGGDSGGEELEEMDRDQI
EKAQLDQHIRERDAASTRKLTDGKPSKREQGELARRSEAMDRGDTSELRTASRHAYLEKR
KKMKVEEMRDEIIDNELIFHGVKMTNAEEQEFRRKKEIYELVKDRVGKDADAGDYYRMPE
AYDAAENLDQAKRFAVPRQRYDDPEASAARGGRRSNFFSEQEAWEEQQIRKSRLNFGSGD
GGRAGGGYELVLEDVVDFVKSTVQAGAEPDGEMDELAEAVDAKVKLQRELQDERKNLPVY
KFKDDLLKAIEKYQVLIIVGETGSGKTTQIPQYLHEAGYTAKGKKIACTQPRRVAAMSVA
ARVAQELGVKLGHEVGYSIRFEDCTSDKTVIKYMTDGMLLREFLGEPDLASYSVVIVDEA
HERTLSTDILFGLVKDIARFRPDVKLLISSATLNAERFSDFFDEAPIFKIPGRRYKVDIH
YTTAPEADYIAAAVVTVLQLHVKQPAGDILLFLTGQEEIETVEELLKQKMRTVGSKIAEL
VICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFCKLKSYNP
RTGMESLRVEPISKASADQRAGRSGRTGPGKCFRLFTEYNFRHDLDDDTVPEIQRSNLAN
VVLRLKALGINDLVSFDFMDPPASEALLKALEELFALGTLNSRGELTKTGRRMAEFPLDP
MLSKAIVASEKYGCSEEVVTIAAMLSAGNAVFYRPKDKLVLADTARQAFHAGNVGDHVAL
LNVYNAWTESGYSSQWCRENFVQPRTMKRARDVRDQLEALLERVEIEHCSGAGDLDGIRK
AVTAGYFRNAARRQKDGSYRAVKSRQMVFVHPSSGMAELPPTWVVYHELVLTSKEYMRQV
TELKPEWLLEIAPHYYQRKDIDGHQPKKTAKDKGPAARQT
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgaggagggccagctcaagacgcgggtgtccgaccgtctgatggcgctcctg
ggctactccgaggtcatggtggtgcgcctggtgctccgcctcgcgcgggacagcgcctcg
gcggccgacctcgcggcgcgcctcgtcgacctcgccggcctcccctcctccgccgacacc
gtcgccttcgcggaggacgtgcacgccatgttcccccgcaagggctcccgcgtcagcgag
taccggaagcaggtgcaggaggcggcggcgttcgccaagaggcagagcgccctcaagctg
ctcgacgacgaggacgatgtcgctgaagacgccggcgccaccaccaccgcgtggtcctct
aacagcaacatcaagaagcgtttcaggcagaaggccgcgagccaaggggatgacgacggc
gaggaggaggcgactgtaatgcgcgattcagggcggaaagtgcgagcgcggcgtgctccc
gcgacggacggcggcgattctggtggggaggaactagaggagatggaccgtgaccagatc
gagaaggctcagctcgaccagcacatcagagaacgcgacgcggccagcactaggaaactg
acggatgggaagccgtccaagcgagaacagggcgagctcgcccggcggtccgaagccatg
gacaggggcgacacctcggagctcaggacggcctcgcggcacgcgtacctggaaaagcgg
aagaagatgaaggtggaggagatgcgagacgagatcatcgacaacgagcttatcttccac
ggcgtcaagatgacgaacgccgaagagcaggaattcaggcgcaagaaggaaatctacgag
cttgtcaaggaccgcgtcggaaaggacgcagacgccggcgactactataggatgccagag
gcatacgacgccgcagaaaacttggatcaggctaagcggttcgccgttccgaggcaacgg
tacgatgaccccgaggcgtcggcggcgagaggcggcaggaggagcaatttcttctcggag
caggaggcctgggaagagcagcagataaggaagtctcggctgaactttggatcaggtgac
ggtggccgggccggcggcggctacgagcttgtcctggaagacgtggtcgacttcgtcaag
tccaccgtgcaggccggcgccgagccggacggcgagatggacgaactggccgaggccgtc
gacgccaaggtcaagttacagcgggagctgcaggacgagaggaagaatctgcccgtgtac
aagttcaaggacgacctgctcaaggccatcgaaaagtaccaggtgctgatcatcgtcgga
gagaccggctccggcaagaccacgcagatacctcagtacctccacgaggccgggtacacg
gccaaggggaagaagatcgcgtgcacgcagccgcggcgcgtggcggcgatgagcgtggcg
gcgagggtggcgcaggagctgggcgtcaagctcgggcacgaggtcggctactccatcagg
ttcgaggactgcacctcggacaagacagtgatcaagtacatgacggacgggatgctcctg
cgggagttcctcggcgagccggacctggcgagctacagcgtggtgatcgtggacgaggcg
cacgagcgcacgctctccaccgacatcctcttcggcctggtcaaggacattgcgcgcttc
cggccggacgtgaagctgctcatctccagcgccacgctcaacgccgagaggttcagcgac
ttcttcgacgaggcccccatcttcaagatccccgggaggcggtacaaggtggacatccac
tacaccacggcgccggaggcggactacatcgccgcggccgtggtcacggtcctgcagctg
cacgtcaagcagcccgccggcgacatcctgctgttcctcacggggcaggaggagatcgag
acggtggaagagctactgaagcagaagatgaggacggtcggcagcaagattgcagagctg
gtgatctgcccgatctacgcgaacctgcccaccgagctccaggccaagatcttcgagccg
acgccggagggcgcccgcaaggtggtcctggccaccaacatcgccgagacgtcgctgacc
atcgacgggatcaagtacgtgatcgacccgggcttctgcaagctcaagtcgtacaacccg
cgcacgggcatggagtcgctgcgcgttgagcccatctccaaggcgtcggcggaccagcgc
gccggccggtcggggcgcacagggccgggcaagtgcttccgcctcttcacggagtacaac
ttcaggcacgacctggacgacgatacggtcccggagatccagaggagcaacctggccaac
gtggtgctgaggctcaaggcgctgggcatcaacgacctggtgagcttcgacttcatggac
cccccggcgtcggaggcgctgctcaaggccctggaggagctcttcgccctcggcacgctc
aacagccgcggcgagctcaccaagaccgggaggcggatggcggagttccccctggacccc
atgctctccaaggccatcgtcgcgtcggagaagtacgggtgctccgaggaggtggtgacc
atcgcggccatgctgtcggccgggaacgccgtcttctaccggcccaaggacaagctggtg
ctcgccgacacggcgcggcaggccttccacgcgggcaacgtcggcgaccacgtggcgctg
ctcaacgtgtacaacgcgtggacagagtcgggctactcgtcgcagtggtgccgcgagaac
ttcgtgcagccgcgcaccatgaagcgcgcgcgggacgtgcgggaccagctggaggcgctg
ctggagcgggtggagatcgagcactgctccggcgccggcgacctcgacgggataaggaag
gcggtcacggcgggctacttccgtaacgccgcgcggcggcagaaggacgggtcgtaccgt
gccgtcaagagccggcagatggtgttcgtgcacccgagctccgggatggcggagctgccg
cctacgtgggtggtgtaccatgagctggtgctgaccagcaaggagtacatgcggcaggtg
acggagctcaagccggagtggctgctggagatcgcgccgcactattaccagcgcaaggac
atcgacgggcaccagccaaagaagacggccaaggacaaaggtccagcggcgaggcaaacc
tga
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integrated database retrieval system
