Triticum aestivum (bread wheat): 123131084
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Entry
123131084 CDS
T07757
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123131084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123131084
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123131084
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123131084
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
123131084
NCBI-ProteinID:
XP_044406783
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Position
6A:573936245..573937804
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AA seq
316 aa
AA seq
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MNPTAGMFPMFPPPPMPFYQTSPMQPPPFYFHAAVPVPSSAVPVRSVWAWNFREESDKLC
HLAWNARYVAVDVHYPGLVHHADRNHNILTVEERYAVVKANVDALKPLQVGIALRDGHGR
HLGAWEFNLRDFCPVSDPHDEGSLAYLTGRGLDVDRLRVRGLSAKMLREKLLRSGLFDPR
CAARSWITYAGAYHIAYLLKIVTGGAPLPKDMAGFVGAVRRYLGDQVYDVARMAADCPAM
PLGLERMADHLGFHPPLGSPRLAAAAGVHALQVFMRLKYSELGGDVERHRGLLHGLHQHY
VVDNLNSCSVGLKQYF
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaacccaaccgccggtatgttccccatgtttccgccgccgccgatgcctttctaccag
acgtccccaatgcagccgccgccgttctacttccatgcagcagttcccgtgccgtcgtcc
gcggtgccggtgcgctctgtgtgggcgtggaacttcagggaggaatctgacaagctctgc
cacctggcctggaacgcccggtacgtcgccgtcgacgtgcactacccgggcctcgtccac
cacgcggaccggaaccacaacatcctcaccgtggaggagcgctacgccgtcgtgaaggcc
aacgtggacgcgctgaagccgctccaggtcggcatcgcgctccgcgacggccacggccgg
cacctcggcgcgtgggagttcaacctccgcgacttctgccccgtgtccgacccgcacgac
gagggctccctcgcgtacctcaccggccgcggcctcgatgtggacaggctccgtgtccgc
ggcctcagcgccaagatgctcagggagaagctgctgcgttccggcctgttcgaccctcgg
tgtgccgcgcgatcgtggatcacctacgccggggcgtaccacattgcgtacctcctcaag
attgtcaccggcggcgccccgctgccgaaggacatggccgggttcgtcggcgccgttcgg
cgttacctcggcgaccaggtctacgacgtcgcgaggatggcggccgactgcccggccatg
ccgctggggctggagcgcatggctgatcacctcggcttccatccgccgttggggagccct
cgcctcgcggctgccgccggcgtgcacgcgctgcaggtcttcatgcggctcaagtacagt
gagttgggcggcgacgtggagagacaccgaggcctgcttcatggcctgcaccagcactac
gtcgtcgacaatctaaattcctgcagcgttggactgaaacagtacttctga
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