Triticum aestivum (bread wheat): 123131456
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Entry
123131456 CDS
T07757
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123131456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
taes03400
]
123131456
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
123131456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
123131456
NCBI-ProteinID:
XP_044407066
UniProt:
A0A3B5YYI0
LinkDB
All DBs
Position
1B:458233795..458241244
Genome browser
AA seq
1493 aa
AA seq
DB search
MDRAARRRARSGGGGTPATPSTRARRRDDAGTIVIDLDDDGAAPAAAAAASRRSSSSSSS
SSAATMPVPLVGAVATRTRSRRLAMQPPAPEEAPRAKRRRKGATRADADGGGGSKGADSS
KSETRPNRRGRPPRASVKSKEAEAEADAPACGDWVEVSRGDGYDGGGRRGDDASGDDNGE
SRADEACGIGQGSHEHHSAASGNRINEHQGSGAVNGSNSCHVMNEVVVSGDAGGLKGRGG
EGGGLGGGFHVDEEHMNEDDTTVGCGNRELPTADAMMDDEAAASEDDFGDYYDDEMMEER
LVADLIRAYSNGGNLEASNGAYGNGGDLEEAEDEMGFTDDGDDDDFMHDADECGMSEPIN
DDAKAPINDDAKAGTQDPVDHKVVAGEVRCHEEEEEEDVIKDEVETKREGATGFNQGRSH
IEILDSDEEVKVLNDASKASKRKPLPRKKEPVVPCVAWRTRSLWGLKQDRLSYNAYFEEL
SDEPEEEDDSEVELDDEDDDSADDDNSASHDSEVELEEEDAKKKAKEEEEAEMRKRKKEI
ASSSAKIRAGPLPLYTNTGKRIQKATPHRCNNSKPRRRIQTHHRIDSSDDEIIDHTVADG
FKWEVDKKPGIQPLNFDKDGSEGPVGNDITQHQKQTHFTWDLERRKRLKLETTTKERQLF
ERHLDSDSSPSSSDQNKRHGDDSKTEREKKHLASKSGKSAKKSSRSGSKTLKRQSLLKLL
MDKMSGDKDGGFSPFDQHPQFDYNFKDPHPLVFSFGTENSTPADIPEQNAKENMLWGDFD
FALESENIGTYYDDEHQGETNVLDLGLPSKTPCSRGKHEFIIDDQIGIRCKYCSLVNLEI
RFVLPSMVSNYTEKTPWRNGSYLKEALMYHDLCEQAGSVDGQSQDFHLYGTVWDLIPGVI
TSMYQHQREAFEFMWTNLVGDIRLDELKHGAKPDVVGGCVICHAPGTGKTRLAIVFIQTY
MKVFPDCRPVIIAPRGMLFAWEEEFKKWDVNVPFHIMNTTDFSGKEDRDICRLIKKEHRT
EKLTRLVKLLSWNKGHGILGISYGLYMKLTSEKKSGCTEGNKVRSILLENPGLLVLDEGH
TPRNERSIMWKTLGKVKTEKRIILSGTPFQNNFLELYNILCLVRPRFGEMFLTEKKVGRR
HYVSKKRQDKFSDKYEKGVWASLTSNVTDDNAEKVRSILKPFVHIHNGTILRTLPGLRES
VIVLKPPPLQKSIIRKVENIGSGNNFEHEYVISLASTHPSLVTAINMSEEEASLIDKPML
ERLRSNPYEGVKTRFVIEVVRLCEALKEKVLIFSQFIQPLELIKEHLSKLFKWRVGKEIL
QMDGKIQPRYRQTSIEVFNNPDSDAKVLLASTRACCEGISLTGASRVVLLDVVWNPAVGR
QAISRAFRIGQKKFVYTYNLITYGTGEGDKYDRQAEKDHLSKLVFSQEDEFNNVRNMLSK
AEMDHCSKLISKDKVLEEMTSHDQLKGMFLKIHYPPTESNMVFTYNQIAPELS
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcgccgctcgccgccgcgcccgcagcggcggcggaggaaccccggcgacgccc
tccacgcgcgcgcgccgccgcgacgacgccgggacgatcgtcatcgacctcgacgacgac
ggggcggcccctgcggctgctgctgcggcgagcaggcgctcttcctcctcctcctcctcc
tcctcggcggcgacgatgccggtgccgctggtgggggcggtggcgacgcggacccgatcg
aggagactggcgatgcagccgccggcgccggaggaggcgccgagggccaagaggaggagg
aagggggcgacgagggcggacgccgacggcggcggtgggagcaagggcgccgactcctcc
aagtcggaaacgagaccgaatcgtcgtgggcggcccccgcgggcctcagtgaagagcaag
gaggcagaggcggaggcggatgcgcccgcctgtggagactgggtggaggtgtcccggggc
gatggctatgacggcggtgggcggcgaggtgatgatgcttctggcgatgataatggcgaa
tctcgcgccgacgaggcatgcggcattggccaggggagccatgagcatcacagtgccgct
agtgggaatcgaatcaatgagcatcaggggagtggggcggtcaatggttcgaattcgtgt
catgtgatgaatgaggtggtggtatcaggcgatgcaggggggctgaaaggtcgtgggggt
gagggaggtgggctaggtggtggttttcatgtggatgaggagcacatgaatgaagacgat
acaacagtaggctgtggaaacagggagctgccgacggcggatgcgatgatggatgacgag
gctgcagcgtctgaagatgactttggagattactatgacgacgagatgatggaggaaaga
ctggttgcagatctgatccgtgcttatagtaatggtggtaatttggaggcaagtaatggt
gcttacggcaatggtggtgatttggaggaagccgaggatgagatgggattcactgatgat
ggtgatgatgacgattttatgcatgatgcagatgaatgtggcatgtctgaaccaatcaac
gacgatgctaaggcgccaatcaacgatgatgctaaggcgggaacgcaggatccggtggat
cacaaggttgttgctggtgaggttaggtgccatgaggaggaggaggaagaagatgttatt
aaggatgaggtggagactaagcgagaaggagctacgggctttaatcaagggagatcgcat
atagaaattcttgattcagacgaggaagtaaaagtgctcaatgatgccagtaaggcctcg
aagaggaaaccgttgccgcgaaaaaaggaacctgtcgtgccatgtgttgcatggaggact
cggtcattatgggggcttaagcaagataggttgtcgtacaatgcgtattttgaggagttg
tccgatgagccagaagaggaggatgattcagaagtggaactggatgacgaggatgatgac
agtgccgatgatgacaatagtgccagtcatgattcagaagtggaactggaagaagaggac
gcaaaaaagaaagcgaaagaggaagaagaggccgaaatgagaaaacgcaagaaagaaatt
gcctcatcttcggctaaaataagggctgggcctttgcctctttatacgaatacagggaag
agaatacaaaaagcaaccccacacaggtgcaacaactcaaagccacggaggaggatacaa
acccaccatagaattgactcatctgatgatgagataattgatcatactgtagcagatggt
ttcaagtgggaagtcgacaaaaaaccagggattcaaccactgaactttgataaagatggc
agtgagggtccagtgggcaatgacattacacagcatcagaagcagacacattttacttgg
gatcttgagaggaggaaaaggctgaagcttgaaacgacgactaaggaacgtcaattgttt
gagcgacatttggactcggactctagcccatccagttcggatcagaataaaaggcatggc
gatgatagcaaaactgagagggaaaagaagcatttggcatcaaaatctggaaaatctgcc
aagaaatccagccgttcaggttcaaaaacgctaaagcgacagtcacttctgaagcttctg
atggataagatgagtggcgacaaagatggaggattctctccttttgaccagcatcctcag
ttcgactataatttcaaggatcctcatccattggtattctcatttggcactgaaaattcc
acaccagctgacataccagagcaaaatgctaaagaaaatatgctgtggggtgactttgac
tttgctttagagtcagagaatattggaacctactatgatgacgagcaccaaggagagacc
aatgtgctagatcttggacttccttctaaaacaccttgttctcgagggaagcatgaattt
attattgacgaccaaataggaatcagatgcaaatactgctccttggtaaatctggaaatc
agatttgttttaccatcaatggtctcaaattacacagaaaaaactccttggcgaaatgga
tcttatttgaaggaagcgttgatgtatcatgatctttgtgaacaagctggaagtgttgac
gggcaatctcaagatttccatctatatggaacagtatgggatctcatccctggtgtcatt
actagtatgtatcagcatcaacgcgaagcatttgaatttatgtggacaaatctagttggt
gatattaggcttgatgagctgaagcatggagctaaacctgatgttgttggaggatgtgtg
atctgtcatgccccagggacaggaaagacacgtttagctattgtttttatccagacatat
atgaaggtatttccagactgtcggccagttattattgcacctcgcgggatgctgtttgct
tgggaagaggagttcaaaaaatgggacgtcaatgttcctttccatataatgaacactaca
gatttttcagggaaagaagacagagacatatgtaggctaataaagaaagagcatcggaca
gagaagttgacgaggcttgtaaaactgctttcatggaacaagggtcatggtattcttgga
ataagttatggtctatatatgaaacttacatcggaaaaaaaatctggctgcactgaaggg
aacaaagtaagaagtattcttctcgagaaccctggtttgcttgtgctagatgaaggacac
acacctaggaacgagcgcagtattatgtggaagacattgggaaaagttaaaactgagaag
cgcataattctatcaggaactcctttccagaacaattttcttgagctttataatatactc
tgtttggtaaggcctaggtttggtgaaatgtttttgactgagaaaaaagtgggcagaagg
cactatgtctcaaagaagcgacaggataagttttctgacaaatacgaaaaaggagtttgg
gcttcattaactagtaatgtaactgatgataatgcagagaaagtcagatcaatactgaag
ccatttgttcatatccataatggcaccattcttcgaactcttccagggctcagagagagt
gtgattgttctgaaacctcctcctcttcagaagagtatcattagaaaggtggagaatatt
gggtctggtaataattttgagcatgaatatgttatttccttagcttcgacacatccttct
cttgtgactgccatcaacatgtccgaagaggaagcttcacttattgataaacctatgctt
gagagattaaggtcaaatccctatgaaggggttaaaacaagatttgtaattgaagtcgtt
cgtttgtgtgaagcactgaaagaaaaggtattgatctttagtcaatttattcagccacta
gaattgataaaagaacaccttagcaagcttttcaaatggagagtagggaaagagattctc
caaatggatgggaagatccaaccacgatatcgccagacttcaattgaagttttcaataat
ccagatagtgatgcgaaggtgttacttgcatctacaagagcttgctgtgaagggattagc
ctaaccggagcttcaagagttgttcttctagatgtggtttggaatcccgctgtgggaagg
caagctatcagtagggcatttaggataggacagaagaaatttgtatatacatacaattta
ataacttatggaacaggtgaaggtgacaagtatgatagacaagcagaaaaggaccatttg
tctaagttggtcttctctcaagaggatgagttcaataatgtcaggaacatgctatcaaaa
gctgaaatggatcactgttctaagttaatatctaaggataaagttctggaggagatgacc
tcccatgaccagctaaagggcatgttcttaaagatacactatccaccaactgagtcaaac
atggttttcacttacaaccagattgcccccgagttgagttaa
DBGET
integrated database retrieval system
