Triticum aestivum (bread wheat): 123131695
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Entry
123131695 CDS
T07757
Name
(RefSeq) pre-mRNA-processing protein 40A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123131695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123131695
Spliceosome [BR:
taes03041
]
Complex A
U1 snRNP components
U1 related factors
123131695
Complex B
123131695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
123131695
NCBI-ProteinID:
XP_044407304
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All DBs
Position
6A:16032939..16048635
Genome browser
AA seq
1011 aa
AA seq
DB search
MASNMQTPGPPQPPRPPMMGSTAPQNMGQPMPMQWPPGPPQQPPQFMQPAPQQYRPVGQA
MPGVNMGMPGQMQHFQQPGPHMPHSGHVPPASQAVPMPYQAARPMSSAPMQPQQQAVFPG
GLMPTMGTPMPPPSYTYQPTSVPPGSQPWGTVPGQGAPLVSPMVQPGHQSLSASVPPVSS
TEPSSADWQEHSSGDGKKYYYNKRTKQSSWEKPAELMTPLERADASTEWKEFTTAEGRKY
YYNKVTKQSKWSIPDELRIARELAEKTSNQQPARETESTTVAPVGSTSVSVEPSLPAKQS
SSLVGTIAPSSHDAIANLPPPGAGPSYNGVISSSSSMQNGGTSAAVVAPVTTSTGDPSVA
SDAGTNRSTYGSSSVPSTTDTKVGASAEDLEEAKKTMPTAGKINVTPLEDKTSEEEPVVY
ATKLEAKNAFKSLLESANVQSDWSWDQAMRVIISDKRYGALKTLGERKQAFNEYLNQRKK
IEVEERRVKQRKARDDFLTMLEECKDLTSSLRWSKAITMFGHDERFNAVERPKEREDLFE
NYLVELQKKEKAKAAEEHKRRIAEYREFLESCDFIKANTQWRKVQDRLEDDERYARLEKI
DRLDVFQVCIFCTLYQFFSFCGLTKHLCLLQDYIRHLEKEEEEQKRIRKEQLRRQERKNR
DEFRKMMEEHVADGTLNAKTYWRDYCSQIKDSRAYLAVASNLSGSMPKELFDDVMEELDK
QYQDDRALIKDEVKSGKIPMLASWTLEDFQAAVTEDEKYKGVSNINIKLIYEDQIERLKE
KDLKEAKKRQRLGDNFLDLLYSIKEITAASTWDDSKSLFDDTQEYRDLGGETYAKELFEE
YIARLKERLKEKERMREEEKAKKEKDREERDKKKEKEKEKKEKDRKEKERDREKEREKEK
GKDRSRRDEMDIDDDVEIHASKDKKREKDKEKKHKRRHHDTTDSERDEKDDSRKSRRHSS
DRKKSRKHTHASDSDSENRHRRHKKDRDSSRKNGGHEELEDGELGEDGEIH
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtaatatgcagactcctggtccgcctcagcccccccggcctcctatgatgggt
tctaccgcaccacaaaatatgggacaaccaatgcccatgcagtggccacctggtccgcca
caacagcctcctcagttcatgcaaccagcgccacaacagtatcggcctgttggtcaggcc
atgccaggagttaacatgggcatgccagggcagatgcaacattttcagcaacctgggcca
catatgcctcactctggtcatgttccgcctgcatcgcaagctgttcctatgccgtaccag
gcagccagacctatgtcatcagctcctatgcagccacagcagcaagctgtattccctggt
ggacttatgcccaccatgggcacccctatgccgcctccttcttatacctatcaaccaaca
tcggttcctcctggatctcaaccctggggcacagtcccgggtcagggcgcacctcttgtg
tcgccgatggtgcagcctgggcatcagtctctctcagcttcagtgcccccagtgagctca
actgaacctagctctgcggattggcaagagcacagttcaggggatggaaagaagtactat
tacaataagaggacaaagcaatcaagttgggagaaacctgctgagttgatgacccctttg
gagcgggctgacgcttcaactgaatggaaagaatttactacagcagaagggcggaagtac
tattacaacaaagtgacaaagcaatccaaatggtctattcctgacgagctaaggattgca
cgtgaattagcagaaaagacatcaaatcagcagcctgcccgggagactgaatccactact
gttgcccctgttggatccacttctgtttctgtggagccttccttacctgccaaacagtct
tcatctttagtaggaacaattgctccaagctcccatgatgcgatagcaaacttgcctcct
cctggtgctggcccgtcgtacaatggggttatatcttcttctagttccatgcaaaacggt
ggaacaagtgctgctgtggttgcccctgttacaacgagcactggagatccatcggttgca
agtgatgcagggacaaacagaagcacttatggaagttcatctgtacctagtactactgac
acaaaagttggagcatctgccgaagatttggaggaggccaaaaagacgatgccaactgca
gggaagatcaatgttactccgctggaggataaaacaagtgaagaagaacctgttgtttat
gctactaagttggaagcaaagaatgcatttaagtccctgcttgaatcggcaaatgttcag
tcagattggtcatgggatcaggctatgagagttattataagtgacaaaagatatggtgcc
ctgaaaactcttggagagagaaagcaagctttcaatgagtacttaaaccagcggaaaaag
attgaagttgaggagaggcgtgtcaagcaaaggaaagcacgtgatgattttctcacaatg
ctggaagaatgtaaggaccttacatcatcactgagatggagcaaagcaattactatgttt
gggcatgatgaaaggttcaatgctgttgaacgccccaaggagcgtgaagatttatttgag
aactatctcgtggagctacaaaagaaggaaaaagcaaaggctgctgaagagcacaaaaga
cgaatagcagaatatagagaatttcttgagtcatgtgatttcatcaaggcaaacacccag
tggcgaaaagttcaagatcggctagaggatgatgaacgctatgctcgacttgagaagatt
gaccgcttggatgtttttcaagtttgtatcttctgcactctatatcaatttttctcattt
tgtggcttaacaaaacatctctgtttgttacaggactatataaggcatcttgaaaaagaa
gaggaagaacagaagagaattcggaaggagcaattaaggagacaagaacggaaaaaccgc
gatgagtttcggaagatgatggaagaacatgttgctgatggcacacttaacgcaaaaact
tactggcgtgactactgttcacagataaaagattcacgtgcttacctggcagttgcttca
aacttgtctggctcgatgccaaaagaactctttgatgatgtcatggaggagcttgataag
cagtatcaagatgatagggctttaattaaagatgaagtgaaatctggaaagattcctatg
ttggcctcatggacattagaggacttccaagctgctgttactgaggacgaaaaatataaa
ggagtgtcaaacataaatatcaagcttatttatgaggaccaaattgaaaggctcaaggaa
aaggatctaaaggaggccaagaagcgtcagcgactgggtgataattttctggatctactg
tattcaatcaaggaaattactgctgcttcaacatgggatgattctaaatcactatttgat
gatacccaggaatacagggatctgggtggcgagacatatgctaaagagctttttgaagag
tatattgcccgcctcaaagaaaggcttaaagagaaagagcgcatgagggaagaagagaag
gcgaagaaagagaaagaccgtgaagagagagacaagaagaaagagaaggaaaaggaaaag
aaggagaaagatcgcaaagaaaaagaaagagaccgagagaaggaaagagaaaaggaaaaa
ggaaaagaccggtcaaggagagatgaaatggatattgatgatgatgtggaaattcatgcc
tcgaaagataagaaacgagagaaggataaagaaaagaagcataaaaggcgccaccatgac
accacagattctgaaagggatgagaaggatgactcgaggaaatctcgaaggcatagcagt
gatcgcaagaaatctaggaagcacacccatgcttcagactcagatagtgaaaaccggcat
agaagacacaaaaaggatcgagatagttcccgcaaaaatggtgggcatgaggagcttgaa
gacggtgaacttggagaagatggggagatccattag
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