Triticum aestivum (bread wheat): 123131708
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Entry
123131708 CDS
T07757
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123131708
Spliceosome [BR:
taes03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
123131708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
123131708
NCBI-ProteinID:
XP_044407316
LinkDB
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Position
6A:17858119..17866036
Genome browser
AA seq
784 aa
AA seq
DB search
MENPDGQAGADAGLPPPPPPPLDAAGAGLGSDPAEVLPPPPPHLPGDAPYDAAQGADGSA
YPAEHAALNGTSGDAAGYQAAGATENGAAADEMADPMVAEQSYEDAVGSAEEARLWDVVT
ADCLDFDAWTALIEETERIAESNILKIRKVYDAFLAEFPLCFGYWKKYADHEGRLDGVNK
VFEVYERAVLAVTYSVDIWCNYCQFAISTYNDPDVIRRLFDRGLAYVGTDYRSNTLWDEY
IKYEESLQAWSHLAVVYTRILEHPIQQLDRYFNCLKELTATRSLSEILTAEETSMYCLTV
ENSAPVLDGEAHPNDVEKTAEPEVSSSTEAEDKAKYISIREELYTKAKEYESKISSFEHA
IRRPYFHVKPLDKPELENWHSYLDFIEREEDINKVIKLYERCVIACASYSEFWIRYVQCM
EDRQSLELANNALARATHVFVKKQTEIHLFSARFKELTGDTDGARAEYQHLHSVLYPGLV
EAIVKHANMEHRLGDKESACLVYEKAIAAEKEKEQSQLLPMLLIQYSRFLYMVGDLEKAR
EISGGLHGLANLTKPVLEAVIFLESIFQSEKRIDLLESLVEKFLTAEQTQGELASLSDKE
ELSSIYLEFLDTFGDVQSIKKATTRHTILFSRKRSTLPSKKRRADDAVMSGRDKMAKTGD
GTQPGMGTDPNAHNPAVWPVTSEASVQQWGAAYAQQAAYPAYGAYDYSQQMPQSAPQAAA
YGAYPPTYPAQAYPQQSYAQPAAMPVAAAVPTPAQAPAPAAAYPQQPAVAAAPQAYYGGA
ATYY
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccccgacgggcaagcgggagccgacgcggggcttcccccgcccccaccgccg
cccctggacgccgcgggggcgggtctgggcagcgacccggccgaggtgctcccaccgcca
cccccgcatctcccgggggacgccccgtacgacgcggcgcagggagccgacggatccgcg
tacccggccgagcacgccgcgctgaacgggacctccggcgacgcggcgggctaccaggcc
gcgggggccacggagaacggcgccgccgccgacgagatggccgaccccatggtcgccgag
cagtcgtacgaggatgcagtgggttctgctgaagaggctaggttatgggacgttgtcacc
gcggactgcctggactttgatgcttggaccgcgcttattgaggagacggagaggattgcc
gagagcaacatattgaagatacgcaaagtgtatgatgccttccttgcagagttccctctg
tgctttggctattggaagaaatatgcagatcatgaaggccgtctagatggtgtcaataaa
gtgtttgaggtgtatgaacgggcagttcttgcagttacttattcagtggacatatggtgt
aattattgtcagttcgcgatttcaacatacaatgacccagatgtcatcagaagactgttt
gatcggggtttggcatatgttggaacagattatcgttccaatactttgtgggatgagtac
atcaagtatgaggaatcacttcaagcatggagtcatctagctgtggtatacacaagaata
ttagagcaccctatacagcagcttgatcggtactttaattgcttgaaggagttgactgca
acacggagcctgtcagaaatacttactgctgaggaaacttctatgtattgtcttactgtt
gagaatagtgctccggtacttgatggagaggcacatcctaatgatgtagaaaaaactgca
gagcctgaagtttcatcttcaacagaagcagaggacaaggcaaaatatatttccattaga
gaagagttgtatacgaaggccaaagagtatgaatctaagattagtagttttgagcatgct
attagaagaccatactttcatgtcaagcctcttgacaaaccagagcttgaaaattggcac
agctatcttgattttatcgagagggaagaagacattaataaggttatcaagttatacgaa
agatgtgttattgcgtgtgctagctattcagaattctggatccgctatgtgcaatgcatg
gaggatagacaaagcctagaactggcaaacaatgctcttgctcgtgccactcatgtgttt
gtcaagaagcagacagagatccatctgttcagtgcaagattcaaggagcttactggtgat
actgatggagcacgtgcagagtatcaacatctccactcagtgttatatcctggcctcgtc
gaagccattgtgaagcatgctaatatggagcaccggctgggagataaggaatctgcttgt
ttagtctatgagaaagccattgctgctgaaaaggagaaggagcagagccagcttttacca
atgctactgatccagtactcacgtttcttatatatggtcggtgacttggaaaaggcaagg
gagatctcaggtggactgcatgggctagctaaccttactaaaccagttcttgaggctgtc
atctttcttgagtcgatctttcagtctgagaagcgtattgatttgttagaatcactggtg
gagaagtttcttacagctgaacagactcaaggggagctggcaagcttaagtgacaaagaa
gaattatcttccatatatttagagtttttggatacgtttggggatgtacagtcaatcaag
aaggctacaactcgacatactattctcttttcacgtaaaaggagcactctgccatcaaag
aaacgaagagcagatgatgctgtcatgtccggtagagataaaatggccaaaaccggagat
ggcacccaaccaggcatgggaactgatccaaatgctcataatcctgcagtttggcctgtg
acttctgaagcatcagtgcagcaatggggggctgcttacgcacagcaggctgcttatcct
gcatatggagcttacgactacagccaacaaatgccccaatctgctcctcaagcagccgct
tatggtgcctatcctcccacataccctgcccaggcctacccgcagcagagctacgcacaa
cctgcagcgatgcccgtggcagcagcagtgcccacccccgcacaggcgccggcacctgca
gcagcttaccctcagcaacctgccgtggctgccgccccccaagcttactacggcggcgcc
gccacgtactactga
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