KEGG   Triticum aestivum (bread wheat): 123132227
Entry
123132227         CDS       T07757                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
taes  Triticum aestivum (bread wheat)
Pathway
taes03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:taes00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123132227
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:taes03041]
    123132227
   03036 Chromosome and associated proteins [BR:taes03036]
    123132227
Spliceosome [BR:taes03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    123132227
 Complex B
    123132227
 Complex C
   U2 SnRNP specific factors
    123132227
Chromosome and associated proteins [BR:taes03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    123132227
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_ECM29 HEAT_2 HEAT_EF3_N Htt_N-HEAT_1 Cnd1 XMAP215_CLASP_TOG Adaptin_N Vac14_Fab1_bd UME IFRD
Other DBs
NCBI-GeneID: 123132227
NCBI-ProteinID: XP_044407933
LinkDB
Position
6A:88660665..88666415
AA seq 1282 aa
MDGIDAELARAQDERRKLEEALAAGAPMAVSSVTFDKDLYGGGGSGSDRFAGYDTSIPAS
EDDAPEDDSAEPSAANPAVRRLASYTGHAVAAADIPRSEDDDGMPAKRSQRIIDREDDYR
RRRLDRIISPERHDAFASGEATPDPSVRTYADAMRESKVQQEKEHVLREIAKKKKEEEEK
AKEKKAAPQPQPAATKRRNRWDQSQDGDAAAGAKKSKTSDWDAPDATPGIGRWDATPGRV
GDATPSVRRNRWDETPTPGRMADADATPAAGGITPGATPSGAWDATPKLPGGLVTPTPKK
QRSRWDETPASMGSATPGGTAATPAGFNTPGQTPFGAENLATPTPGHLAARGPMTPEQYQ
LLRWERDIEERNRPLTDEELDSMFPQEGYKILEPPASYQPIRTPARKLLATPTPLGTPMY
AIPEENRGQHFDVPKDLGPGLPLMKPEDYQYFGTLLNEDEEEQLTPEEQKERKIMKLLLK
VKNGTPPQRKTALRQLTDKAREFGAGPLFNKILPLLMQPTLEDQERHLLVKVIDRVLYKL
DELVRPFVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEY
VRNTTARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILMGCAVLPHL
KNLVEIIEHGLSDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVL
AAFLKAIGFIIPLMDALYASYYTKEVMQVLIREFQSPDEEMKKIVLKVVKQCVSTEGVEA
DYIRSDILPDFFKHFWVRRMALDRRNYKQLVETTVEMANKVGVTGIVGKIVEDLKDESEP
YRRMVMETIEKVVANLGASDIDPRLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALG
QRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAIVMKQCQEEQLMGHLGVVLYEYL
GEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRI
ADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLK
VQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMG
KDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYIWPNIFET
SPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVA
SYPALGDDGDNIFSRPELAMFV
NT seq 3849 nt   +upstreamnt  +downstreamnt
atggacgggatcgacgcggagctcgcgcgcgcgcaggacgagcgccggaagctggaggag
gccctggcggccggcgcgcccatggccgtctcctccgtcaccttcgacaaggacctctac
ggcgggggcggctccggctccgaccgcttcgccggctacgacacctccatcccggcctcc
gaggacgacgcgcccgaggacgacagcgccgagccctccgccgccaaccccgcggtgcgc
cgtctcgcgtcctacacgggccacgccgtcgccgccgccgacatcccccgctcggaggac
gacgacgggatgcccgccaagaggtcccagcgcatcatcgaccgcgaggacgactaccgc
cgccgccgcctcgaccgcatcatctcgcccgagcgccacgacgccttcgcgtccggggag
gccaccccggacccctccgtccgaacctacgccgatgccatgcgcgagagcaaggtgcag
caggagaaggagcacgtgctgcgggaaatcgccaagaagaagaaggaggaggaggagaag
gccaaggagaagaaggctgcgcctcagccgcagccagccgcgaccaaacggcgcaatagg
tgggatcagtcgcaggacggcgatgctgctgctggggccaagaagtccaagacctcagac
tgggatgcccctgatgcaactcctgggattgggcgctgggacgccactcctggccgtgtt
ggagatgcaacgccctctgtgaggaggaataggtgggatgagactccaactccagggagg
atggctgacgcagatgcaactcctgcagccggtggcattactccaggagccaccccttct
ggggcatgggatgctactcctaagctgcctggtgggcttgtcacaccaacacccaagaag
cagagatctaggtgggatgagacaccagcaagtatggggagtgcaacacctggtggtaca
gcagcgacacctgctgggttcaacactcctgggcaaacaccattcggagcagagaacctt
gccacgccaacacctggtcaccttgctgctcgtggcccgatgactccggagcagtaccag
ctcttgcggtgggagcgggacattgaggagcggaacaggcctctcactgatgaggagctt
gactccatgttcccgcaggagggatacaagattcttgagcctccagcttcataccagccc
atacgtaccccagcaaggaagctgcttgctacgccaacacctctgggcacaccaatgtat
gctattccagaggagaaccgtggacagcattttgatgtgcccaaggacttgggtcctggt
ttgcccctcatgaagccagaggactaccagtactttgggacgttgctgaatgaggacgag
gaggagcagctaacgccagaggagcagaaggagagaaaaatcatgaagctcctgctcaag
gtaaagaacggcacacccccacagcggaagacagcactccggcagctcacggacaaagca
cgcgagtttggtgctggcccattgttcaacaaaatcctgccattgctcatgcagccaaca
cttgaggaccaggagcggcatctcctggtgaaggtcattgatagggtgctgtataagctg
gatgagctggtccgtccatttgtgcacaagattcttgttgttatcgagccacttttgatt
gatgaggattactatgctcgtgttgagggcagggagattatctcaaatcttagcaaagct
gccggtcttgctactatgattgctgccatgagaccggatattgataacattgacgagtat
gtgaggaatacgactgctagggcattcagtgtggtggcttctgctttgggtatcccggcc
ctcctcccatttttgaaggctgtttgtcagagtaagaagtcctggcaagctcggcacact
ggtatcaagattgttcagcagattgctattctcatgggctgcgctgttctgcctcacctt
aagaacctagttgagatcattgagcatggtctaagcgacgagaaccagaaagtgcggacg
atcactgccctatctcttgctgcacttgctgaagctgccgcaccctacggtattgaaagt
tttgatagtgtgttgaaacctctctggaagggtatcagatctcaccgtggaaaggtcctt
gctgccttcttgaaggctattggtttcatcatccctcttatggatgctctgtatgccagt
tactacacgaaggaggtgatgcaagtcctgattagagagttccagtccccagatgaagag
atgaagaagattgtcctgaaggttgttaagcagtgtgtcagtacagagggtgtggaggct
gattatatccggagtgacatccttccagacttcttcaaacacttctgggttaggagaatg
gccctagatcgtaggaactataagcaacttgtggaaacaacagtagagatggcaaacaag
gtgggagtgactggtatcgttgggaagattgttgaggatctgaaagatgaaagtgagcct
tataggagaatggtgatggaaacaattgagaaggtggtggccaacttgggtgcctcggat
attgatcctcgtctggaggagctgcttattgatggcatcctgtatgctttccaagagcag
acaagtgatgatgcaaatgtcatgcttaatggttttggagctgttgtgaatgcgctcggg
cagagggtcaagccttaccttcctcagatatgtggtaccattaagtggcggttgaacaac
aagagtgcgaaagttaggcagcaagctgctgatctgatctcaaggatagctattgttatg
aagcagtgccaggaggagcagcttatgggtcacctgggtgttgtgctgtatgagtacctg
ggagaggagtatcctgaggtgctgggttcaattctcggagcattgaaggctatcgtgaat
gttattggtatgactaagatgacgcctccgatcaaggatctccttcctcgtctgactccc
atcttgaagaataggcatgagaaggtccaagagaactgcattgatctagttggtaggatt
gctgatcgtggagcagaatttgttccagctagggagtggatgaggatttgttttgagttg
ctggaaatgttgaaggctcacaagaagggtatcagaagagccactgtgaacacatttggt
tatattgccaaggcaattgggccacaggacgtgttggccactctgttgaataacttgaag
gtgcaggagcgacagaaccgtgtctgcaccactgtagcaattgctattgttgctgaaact
tgctcgcctttcaccgttttgcccgccctcatgaatgagtaccgagttccggagctaaat
gttcagaatggtgtattgaagtctctctctttcctctttgagtatattggcgagatgggc
aaagattacatatatgctgtcactcccttgctcgaagatgccctaatggacagggatctg
gttcacaggcagactgctgcatctgctgttaagcatatggctctgggagttgctggcttg
ggttgtgaggatgctcttgtccatttgcttaactatatctggcccaacatattcgagaca
tctccccatgttataaatgccgtcatggaggctattgaggggatgcgagttgctctaggt
gcagctgtggttctgaattattgcctccaaggccttttccatccagcaaggaaagtacgt
gaagtatattggaagatctataactcgctgtatattggtgcacaagatgcacttgttgcc
tcttatcctgcactaggcgatgatggagacaatatcttcagccgtccagagctagccatg
tttgtgtga

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