Triticum aestivum (bread wheat): 123133345
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Entry
123133345 CDS
T07757
Name
(RefSeq) WD repeat-containing protein RUP2-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes04120
Ubiquitin mediated proteolysis
taes04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123133345
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
123133345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
taes04121
]
123133345
Enzymes [BR:
taes01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123133345
Ubiquitin system [BR:
taes04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123133345
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
123133345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_DCAF12
Beta-prop_EIPR1
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
123133345
NCBI-ProteinID:
XP_044408770
UniProt:
A0A3B6PFK5
LinkDB
All DBs
Position
6B:38200813..38202628
Genome browser
AA seq
410 aa
AA seq
DB search
MTNPCSPSSPSSSSPTSAHHRRYEEPAAAAAPYVGNGGRVDHGISFPAAVDDVEGAELSP
PRCEWEFRLAATVPSPSLAGASEAIGSVDFDPAGRLLATGGIARKVRIYDVAGLPSSPSP
AACICVPAKLSSVRWRPEEGGRRAVGCGDYDGVVTEYDVERGVAAWERDEHAGRRVWALD
YAPRGAQTSMAASGSDDRTAHVWDPRAPSGSWATARAGGAVLCVEFDPSGGPQLAVGSAD
RRAAVYDVRALGHGEVASMDGHARAVTYVRWAPARRVVTSAADGTHRLWEWPSTPELSGP
AREVRSYSGHVSGRSFVGMGLWRGAGLVASGSESNHVFVYDLRWGKPVWVHPFDVASDSS
PDAEGFVSAVTWLQGDADCGGALVAGRSDGVLKMFTCQPRRGDDHQVDEL
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacccctgctccccgtcttctccttcctcctcttctcccacctccgcacaccat
cgccggtacgaagaacctgcggcggcggcggcgccatacgtgggcaacggcggccgggtc
gaccacggcatttcgtttccggcggccgtagacgacgtcgagggcgccgagctgtcgccc
ccgcggtgcgaatgggagttccggctcgcggccaccgtgccgtccccgtcgctggccggc
gcgtccgaggccatcggcagcgtcgacttcgaccccgccggccgcctcctcgccacgggc
ggcatcgcgcgcaaggtccggatatacgacgtcgccggcctgccgtcctcgcctagcccc
gccgcctgcatctgcgtgccggccaagctcagcagcgtgcggtggcgtcccgaggagggg
ggcaggcgcgcggtggggtgcggcgactacgacggcgtcgtgacggagtacgacgtggag
cgcggcgtcgcggcgtgggagcgcgacgagcacgccgggaggcgggtgtgggcgctggac
tacgcgccccgcggcgcgcaaacgtccatggcggcgtccggctcggacgaccggacggcg
cacgtttgggacccgcgcgcgccctcggggtcctgggccacggcgcgggccggcggcgcc
gtgctgtgcgtggagttcgacccgtccggcgggccgcagctggcggtgggctcggcggac
cggcgcgcggccgtgtacgacgtgcgcgcgctgggccacggcgaggtcgcgtccatggac
gggcacgcacgcgccgtgacgtacgtgcggtgggcgccggcgcggcgggtggtgacgtcg
gccgccgacgggacgcaccggctgtgggagtggccgtcgacgccggagctgtcgggcccg
gcgcgggaggtgcggtcgtacagcggccacgtcagcgggcggagcttcgtggggatgggg
ctgtggcgcggcgccgggctggtggccagcgggtctgagtccaaccacgtcttcgtctac
gacctcaggtggggcaagcctgtctgggtgcaccccttcgacgtcgcctccgacagctcc
cccgacgccgaagggttcgttagcgccgtgacgtggctgcagggcgacgccgactgcggt
ggggcgctcgtcgccggcaggtcggacggcgtgctgaagatgttcacgtgccaaccacgc
cggggagatgaccaccaagtggacgagctatag
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