Triticum aestivum (bread wheat): 123135548
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Entry
123135548 CDS
T07757
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123135548
Spliceosome [BR:
taes03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
123135548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
123135548
NCBI-ProteinID:
XP_044410589
UniProt:
A0A3B6PFA9
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Position
6B:31070924..31078442
Genome browser
AA seq
783 aa
AA seq
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MENPDGQAGADAGLPPPPPPPLDAAAGAGLGGDPAEVLPPPPPHLPGGAPHEVAAQGPDG
SAYPAEHAALNGTSGDAAGYQAAENGAAADEMADPMVPEQSYEDAVGSAEEARLWGIVTA
DCLDFDAWTALIEETERIAESNILKIRKVYDAFLAEFPLCFGYWKKYADHEGRLDGVNKV
FEVYERAVLAVTYSVDIWCNYCQFAISTYNDPDVIRRLFDRGLAYVGTDYRSNTLWDEYI
KYEESLQAWSHLAVVYTRILEHPIQQLDRYFNCLKELTATRSLSEILTAEETSMYCLTVE
NSAQVLDGEAHPNDVEKTAEPEVSSSTEAEDKAKYISIREELYTKAKEYEFKISSFEHAI
RRPYFHVKPLDKPELENWHSYLDFIEKEEDINKVIKLYERCVIACASYSEFWIRYVQCME
DRQSLELANNALARATHVFVKKQTEIHLFSARFKELTGDTDGARAEYQHLHSVLYPGLLE
AIVKHANMEHRLGDKESACLVYEKAIAAEKEKEQSQLLPMLLIQYSRFLYMVGDLEKARE
ISGGLHGLANLTKPVLEAVIFLESIFQSEKRIDLLESLVEKFLTAEQTQGELASLSDKEE
LSSIYLEFLDTFGDVQSIKKATTRHTILFSRKRSILPSKKRRADDAVMSGRDKMAKTGDG
TQPGMGTDPNAHNPAVWPVTSEASAQQWGAAYAQQAAYPAYGAYDYSQQMPQSAPQAAAY
GAYPPTYPAQAYPQQSYAQPAAMPVAAAVPTPAQAPAPAAAYPQQPAVAAAPQAYYGGAA
TYY
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccccgacgggcaagcgggagccgacgcggggctgcccccgcccccaccgccg
cccctggacgccgcagcgggggcgggcctgggcggcgacccggccgaggtcctcccgccg
ccgcccccgcacctcccggggggcgccccgcacgaagtggcggcgcaggggcccgacgga
tccgcgtacccggccgagcacgccgcgctgaacgggacctccggcgacgcggcgggctac
caggccgcggagaacggcgccgccgccgacgagatggccgaccccatggtgcccgagcag
tcgtacgaggatgccgtgggttctgctgaagaggctaggttatggggtatcgtcactgca
gattgcttagactttgatgcttggaccgcgcttattgaggagacagagaggatcgctgag
agcaacatattgaagatacgcaaagtgtatgatgccttccttgcggagttccctctgtgc
tttggctattggaagaaatacgcagatcatgaaggccgtctagatggtgtcaataaagtt
tttgaggtgtatgaacgggcagttcttgcagttacttattcagtggacatatggtgtaat
tattgtcagtttgcgatttcaacatacaacgacccagatgtcatcagaagactgtttgat
cggggtttggcatatgttggaacagattatcgttccaatactttgtgggatgagtacatc
aagtatgaggaatcacttcaagcatggagtcatctagctgtggtatacacaagaatatta
gagcaccctatacagcagcttgatcggtactttaattgcttgaaggagttgactgcaaca
cggagcctgtcagaaatacttactgctgaggaaacttccatgtattgtcttactgttgag
aatagtgctcaggtacttgatggggaggcacatcctaatgatgtagaaaaaactgcagag
cctgaagtttcatcttcaacagaagcagaggacaaggcaaaatatatttccattagagaa
gagttgtatacgaaggccaaagagtatgaatttaagattagtagttttgagcatgctatt
agaagaccatactttcatgtcaagcctcttgacaaaccagagcttgaaaattggcacagc
tatcttgattttatcgagaaggaagaagacattaataaggttatcaagttatatgaaaga
tgtgttattgcgtgtgctagctattcagaattctggatccgctatgtgcaatgcatggag
gatagacaaagcctagaactagcaaacaatgctcttgctcgtgccactcatgtgtttgtc
aagaagcagacagagatccatctgttcagtgcaagattcaaggagcttactggtgatact
gatggagcacgtgcagagtatcaacatctccactcagtgttataccctggcctcctcgaa
gccattgtgaagcatgctaatatggagcaccggctgggagataaggaatctgcttgttta
gtctatgagaaagccattgctgctgaaaaggagaaggagcagagccagcttttaccaatg
ctactgatccagtactcacgtttcttatatatggtcggtgacttggaaaaggcaagggag
atctcaggtggactgcacgggctagctaaccttactaaaccagttcttgaggctgtcatc
tttcttgagtcgatcttccaatctgagaagcgtattgatttgttagaatcactggtggag
aagtttcttacagctgaacagactcaaggggagctggcaagcttaagtgacaaagaagaa
ttatcttccatatatttagagtttttggatacgtttggggatgtacagtcaatcaagaag
gctacaactcgacatactattctcttttcacgtaaaaggagcattctgccatcaaagaaa
cgaagagcagatgatgctgtcatgtccggtagagataaaatggctaaaaccggagatggc
acccaaccaggcatgggaactgatccgaatgctcataatcctgcagtttggcctgtgact
tctgaagcatcagcgcagcaatggggggctgcttacgcacaacaggctgcttatcctgca
tatggagcttacgactacagccaacaaatgccccaatcggctcctcaagcagccgcttat
ggtgcctatcctcccacataccctgcccaggcctacccgcagcagagctatgcacaacct
gcagcgatgcccgtggcagcagcagtgcccaccccagcacaggcgccggcacccgcagca
gcttaccctcagcaacctgccgtggctgccgccccccaagcttactacggcggcgccgcc
acgtactactga
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