Triticum aestivum (bread wheat): 123135686
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Entry
123135686 CDS
T07757
Name
(RefSeq) nuclear cap-binding protein subunit 1-like isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03013
Nucleocytoplasmic transport
taes03015
mRNA surveillance pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123135686
09122 Translation
03013 Nucleocytoplasmic transport
123135686
03015 mRNA surveillance pathway
123135686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123135686
03041 Spliceosome [BR:
taes03041
]
123135686
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
123135686
Spliceosome [BR:
taes03041
]
Common components
Common spliceosomal components
Cap binding complex
123135686
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
DUF5798
CCDC39
Zw10_N
DUF7935
ATG14
Motif
Other DBs
NCBI-GeneID:
123135686
NCBI-ProteinID:
XP_044410796
LinkDB
All DBs
Position
6B:complement(49065132..49084619)
Genome browser
AA seq
837 aa
AA seq
DB search
MSAGWRTLLLRIGDRCPEYGGTADHKEHIEICYNVLSREYEHSKDDIFEFLLQCAEQLPH
KIPFFGVLIGLLNLENEDFSKGIVDATQANLQDALHTENRDRIRILLRFLCGLMCSKVIS
PNSIIETYETLLSSAATILDEDAGNASWQPRADFYVYCILASLPWGGSELFEQVPDELER
VLVGIQSYISIRRHFDDIAFSVFETDEGNSPNKKDFMEDLWERMQLLSRNGWKVKSVPKP
HLSFEAQLVVGKSHRFHPVSYPPPAFTMSSSEILKGQEMHEANLKYPQRLCRLHIFPTNK
AENMQPVDRFVVEEYILDVLLFFNGCRKECAFYLVSLPVSFRYEYLMAETIFSQLLLLPN
PPFRPIYYTLVIIDLCKALPAAFPSVVVAAVHALFDRISNMDTECRTRLILWFSHHLSNF
QFVWPWQEWANVKGLPKWAPQRVFVQEVLEREIRLSYFEKIKQSIEDAAELEGLLPPKAG
PNFRYHTDESKESTEGHRLSKELVSMVRGRKTTRDIILWAEEQIVPANGAKFAVDVVSQT
LLDIGSKSFTHLITVLERYGQIISKLCPDEEMQLLLMDEVSAYWKNSTQMTAIAIDRMMG
YRLISNLAIVKWVFSPANVNQFHVSDRPWEILRNTVSKTYNRISDLRKEIQTLRKSIQVA
KEASAKAIKELEEAKSILEIVEGQPVSSERPGRLRRLQGFADKAKEEEVTIEESLEAKQA
LLARGLEEGKELLRLLFKSFVDVLTERLPPVSADGDVPNLRTGDPNVTFPASDPEAATME
IDDENGADNNSQVNGENTEVGYTIGELEQWCLCTLGYLKSFSRQYATEIITGVGCLN
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctggctggaggacgctgctgcttcgcatcggcgacaggtgccccgagtacggg
ggaaccgccgaccacaaggagcacatcgaaatctgttacaatgtgctttctcgtgaatat
gaacactccaaagatgatatttttgagtttctccttcagtgtgcagaacaattacctcac
aagattcctttctttggagttttgataggtttgttaaatttagaaaatgaagatttttcc
aagggtatcgtggatgcaacacaggcaaacctacaggatgctttgcatactgaaaaccgt
gataggatcaggatattgctgcggtttctctgtggcctgatgtgcagcaaagttatatcc
ccaaattccattattgagacatacgagacacttttatcatctgctgcaactatattggat
gaggatgctggaaatgcttcttggcaaccacgtgctgatttttatgtttattgtattttg
gcttcccttccatggggtggttcagaattgttcgagcaagtcccggatgaacttgagagg
gttctggttggtatacagtcttacataagtatcagaaggcattttgatgatattgctttc
tcagtcttcgagacggatgaaggcaactctcccaataagaaggatttcatggaagatcta
tgggagcgtatgcaacttctttctcgtaatggatggaaggttaaaagtgttccaaaacct
cacttgtcgtttgaagctcagttagtagttggaaaatctcaccgtttccacccagttagt
tacccaccgcctgctttcacgatgtcatcttctgagatattaaaagggcaagagatgcat
gaagccaatctaaagtatcctcaaaggctttgtaggctccatatatttccaacaaataaa
gctgagaatatgcaacctgtagaccgttttgttgttgaggaatacatattggatgtgctg
cttttcttcaatggatgtcgcaaagaatgtgcattttatctggtcagccttcctgtgtct
tttcggtatgaatacctgatggctgagaccatattttcacagctactattgctgccgaat
ccacctttcaggccaatctactatacgttggttatcatcgatctttgcaaggctttgcca
gccgcatttccatctgtggtggtagcagcagtacacgctctttttgacagaataagtaac
atggatacagagtgccgcaccagacttatcctatggttttcacatcatttgtcaaatttt
caattcgtttggccttggcaggagtgggccaatgtgaagggcctaccaaaatgggctcca
caacgtgtttttgtccaagaagtactagaaagggaaattcggttgtcctatttcgagaaa
atcaagcagagtattgaagatgctgctgagttggaagggttgttacccccaaaagctggc
cctaatttcagatatcatacagatgaaagcaaagaaagcaccgaaggccacaggctatcc
aaggaacttgttagcatggttagaggaaggaagactacacgtgatattattttgtgggct
gaggaacaaatagttcctgcaaatggagccaaattcgcagttgatgttgttagtcagaca
cttcttgacattggttcaaaaagtttcacccatcttatcactgttttggagagatatggt
caaataatttccaaactgtgcccagatgaggaaatgcagttattgttgatggatgaagtc
agtgcttactggaagaacagtacccagatgactgctatagctattgatagaatgatgggt
tatcgcttaatttccaacttggctatagtcaagtgggttttttctcctgctaatgtcaac
caatttcatgtgtcggatcgtccatgggagattcttaggaatactgttagtaagacatac
aatcgaatcagtgatcttcggaaggaaattcagacactgaggaaaagtattcaagttgct
aaagaggctagtgcaaaagccatcaaagaattggaggaggctaaatcaatacttgaaatc
gtagagggccaacctgtgtcatctgaaagaccaggcaggctgagacgacttcaaggtttt
gctgacaaagcaaaagaagaggaagtaactattgaagaatcgttagaggcaaagcaggct
ctccttgcccgggggcttgaagaaggcaaagaattgcttaggttattattcaagagcttt
gttgatgtgcttactgaacgcctgccacctgtttctgctgatggagatgttcctaaccta
cgcactggagatcctaatgtaacatttccagccagcgatcctgaagcggcaactatggag
atagacgatgaaaatggagcagataacaatagtcaagtgaatggtgaaaatacagaagtt
ggttatactattggagagcttgagcaatggtgcttatgcacattggggtatctaaagtca
ttttctcgacagtatgcaacagagataattactggtgttggttgtttgaactga
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