Triticum aestivum (bread wheat): 123136182
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Entry
123136182 CDS
T07757
Name
(RefSeq) spliceosome-associated protein 130 A-like
KO
K12830
splicing factor 3B subunit 3
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123136182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123136182
03041 Spliceosome [BR:
taes03041
]
123136182
03036 Chromosome and associated proteins [BR:
taes03036
]
123136182
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
123136182
Spliceosome [BR:
taes03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
123136182
Complex B
123136182
Complex C
U2 SnRNP specific factors
123136182
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
123136182
TFTC complex
123136182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
123136182
NCBI-ProteinID:
XP_044411435
UniProt:
A0A3B6PI68
LinkDB
All DBs
Position
6B:complement(138266772..138272194)
Genome browser
AA seq
1227 aa
AA seq
DB search
MYLYSLTLQRATGAVCAVIGSFSGRDSKKSNAAGSSTQEIAVARGGTLDLLRPDPETGRL
RTLLSVDVFGAIRSLAQFRLTGATKDYLVVGSDSGRLVILEYSPDRNRFDKVHQETFGKS
GCRRIVPGQLLSVDPKGRALCIAALEKQKLVYVLNRDASARLTISSPLEAHKSHTLTFAL
TALDCGFDNPVFGAIELEYGDSDRDPTGQAASHAQKLLTFYELDLGLNHVSRKVSEPIDN
GANMLVTVPGGADGPSGLLVCCDNFVLYRNQGHPEVRAVIPRRVDLPAERGVLIVAAATH
RQKSLFFFLLQTEYGDIFKVDLDHHGDTVSELRIKYFDTIPVASAICVLRSGFLFAASEF
GNHALYQFRDIGRDVDVESSSATLMETEEGFQPVFFQPRALKNLVRIDEIESLMPIMDMR
IANLFDEETPQVYTACGRGSRSTLRILRPGLAISEMARSMLPAEPIAVWTVKKNINDMFD
AYIVVSFANVTLVLSIGETIEEVSDSQFLDTTHSLAVSLLGEDSLMQVHPNGIRHIREDG
RVNEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVEKQDMSGDVACLAI
APVPEGRQRSRFLAVGSYDNTIRILSLDPDDCLQPLSVQSVSSAPESLLFLEVQASVGGE
DGADYPANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLFPCIVSHRQAMLC
LSSRPWLGYIHQGHFLLTPLSCDTLESAASFSSDQCSEGVVAVAGDALRIFTIERLGETF
NETSIPLRYTPRKFVILPKKKYLAVIESDKGAFSAEQREAAKKECLEAAGAAENGNGNGN
QMENGDGQEDGEESNTLPDEQYGYPKAESEKWVSCIRILDPRSTDTTCLLELQDNEAAVS
ICTVNFHDKEHGTLLAVGTTKGLQFWPKRSLASGFIHIYKFVNEGKSLELLHKTQVEEVP
LSLCQFQGRLLAGVGSVLRLYDLGKRKLLRKCENKLFPRTIVSIHTYRDRIYVGDMQESF
HYCKYRRDENQLYIFADDSVPRWLTAANHIDFDTMAGADKFGNIYFARLPQDLSDEIEED
PTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVTCLQKASLIPGGGECLIYGTVMGSVGAL
LAFTSREDVDFFSHLEMHLRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQYPALPADM
QRKIADELDRTPGEILKKLEDIRNKII
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgtacctctacagcctgacgctgcagcgggcgacgggcgccgtgtgcgccgtcatcggc
agcttcagcggccgcgactcgaagaagtcgaacgccgcgggctcctccacgcaggagatc
gccgtcgcccgcggcggcacgctcgatctcctccgcccggacccggagacgggccgcctc
cgcacgctcctctccgtcgacgtcttcggcgccatccgctcgctcgcccagttccgcctc
acgggggccaccaaggactacctcgtcgtcggctccgactccggccgcctcgtcatcctc
gagtactcccccgaccgcaaccgcttcgacaaggtccaccaggagaccttcggcaagtcc
ggctgccgccgcatcgtgcccggccagctcctctccgtcgaccccaagggccgggcgctc
tgcatcgccgccctcgagaagcagaagctcgtctacgtcctcaaccgcgacgcctccgcc
cgcctcaccatctcctccccgctagaggcgcacaagtcccacacgctcaccttcgccctc
acggccctcgactgcggatttgacaaccctgtctttggtgccatcgagctcgagtacggt
gactctgaccgtgaccccacagggcaggctgctagccacgcgcagaagctcctcaccttc
tacgagctcgacctggggctcaatcatgtttcccgcaaggtctccgagccgattgacaat
ggtgctaatatgctagtgacagtgcctggtggtgctgatggccctagcgggcttcttgtt
tgctgtgacaactttgtcctgtaccggaatcagggccacccggaggttcgtgctgtcatt
ccacgccgtgttgacctcccggctgagcgtggcgtcctcatagttgctgctgccacgcac
aggcagaagagcttgttcttcttcttactacagactgagtatggtgatatcttcaaggtt
gacctggaccaccatggtgatactgttagtgagctcaggatcaaatattttgacaccata
cctgtggcatctgctatctgtgtgctgcggtcaggcttcctctttgctgcttctgagttt
ggcaaccatgcactttaccaattccgtgatattggccgggatgtggatgttgagtcctcc
tctgcgacactgatggagacagaggaggggttccagccagtgttctttcagccgagggca
ctcaagaaccttgtccggattgatgagatagagagcctcatgccaatcatggacatgcgt
attgcaaatttattcgacgaggaaacaccccaggtgtacacagcttgtggccgtggctca
cgctccacgctgcgcatccttaggcctggccttgccatcagcgagatggcccgatcaatg
ctgcctgctgagcccattgctgtttggactgtcaagaagaatatcaatgacatgtttgac
gcctacattgttgtgtcctttgctaatgtcacacttgtgctctcaattggagagaccatt
gaagaagtcagcgacagccagttcctggacaccactcactcactagcagtttcgctcctt
ggtgaggattctctcatgcaggtccacccgaacggtatcaggcatatcagggaggatggc
cgtgtcaatgagtggaggacgcctgggaagaaaactatcaccaaggttggatcaaaccgg
ctccaggtggtaattgccctcagtggtggagagctcatctattttgagatggatatgaca
ggtcagctcatggaggtggagaagcaggacatgtctggtgatgtcgcgtgcctggccatt
gcccccgttcctgaagggaggcaaaggtcccgttttctcgcagttggctcctatgataac
accatcaggatactctcccttgaccccgatgactgcttgcagcctcttagtgtacaaagt
gtgtcctcggctccggaatctctcttgttcttagaagtacaggcatcagttggtggcgag
gatggtgcagattatccagccaaccttttccttaatgctggtttgcagaatggtgtcctt
ttccgaaccaatgttgacatggtcactggtcagctatcagacacacggtctcgattcctt
ggtctgagacctccaaagctgtttccctgcatagttagccaccgacaagcaatgctttgc
ctgtccagccgcccctggcttggctatatacatcaaggtcacttcctcttgacaccactc
tcatgcgacacacttgagtctgctgcgtcgttctcttctgaccagtgctcagaaggtgtt
gttgctgttgctggagacgctctgcgtattttcaccatcgaacgtctgggagagacattc
aatgagacatctatccctctgcgttacaccccgaggaaatttgtgattctaccaaaaaag
aaataccttgcagtcattgagagtgacaagggtgcatttagcgcagaacagcgagaagct
gctaagaaggagtgccttgaggctgctggtgcggcagaaaatggaaatggtaatgggaat
caaatggagaatggtgatggtcaagaagatggtgaggagagtaacacacttcctgatgaa
caatatggttacccaaaggcagaatcagaaaagtgggtttcctgcattagaattcttgat
ccgaggagcacggacacaacttgtcttctggaattgcaggacaatgaggcggctgtcagt
atttgcactgtgaatttccatgataaggagcatggtactcttctggctgttggtactacc
aagggattgcagttctggccaaagaggagcctcgcttctggtttcatccacatatacaag
tttgtcaatgaagggaagtcgcttgaacttcttcacaaaacacaagtggaggaagtgcct
ctttctttgtgccagtttcagggtcggttgcttgcaggtgttggttcagtgctgaggtta
tatgatctggggaagagaaagttgctcagaaaatgtgaaaacaagcttttcccaaggaca
atagtgtctattcatacttaccgtgataggatctatgttggtgatatgcaagagtcgttt
cattattgcaagtacagacgggacgaaaaccagctgtatatctttgctgatgacagtgtt
cctagatggcttacagcagcaaatcacatagatttcgacactatggcaggagccgacaag
tttgggaacatatattttgctcgtcttccccaggatctctcagatgaaattgaggaagac
ccaactggaggcaagattaaatgggagcaagggaagttaaatggtgctccaaacaaagtg
gaggagattgtgcagtttcatgttggtgatgttgtgacatgtttgcagaaggcttctttg
atacctggcggaggtgaatgtcttatttatgggactgtgatgggtagtgttggagcactg
cttgcattcacctccagggaagatgttgacttcttctctcatttggagatgcatctccgc
caggagcatccaccattatgtggaagagatcacatggcctacagatctgcatatttccca
gtgaaggatgtgattgatggtgatctctgtgagcagtatccagcccttccagctgatatg
cagaggaagattgccgatgagcttgaccgaactccaggtgaaatcctgaagaagctggaa
gacatcagaaacaaaatcatctag
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