Triticum aestivum (bread wheat): 123137553
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Entry
123137553 CDS
T07757
Name
(RefSeq) regulator of nonsense transcripts UPF2-like isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03013
Nucleocytoplasmic transport
taes03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123137553
03015 mRNA surveillance pathway
123137553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123137553
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
123137553
mRNA cycle factors
P-body specific factors
123137553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
DDHD
PsiA
Motif
Other DBs
NCBI-GeneID:
123137553
NCBI-ProteinID:
XP_044413291
UniProt:
A0A3B6PPB5
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Position
6B:complement(477440035..477458156)
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AA seq
1188 aa
AA seq
DB search
MESSQTENLTDTKQDDDARQSKQEDEEARIEEYKKLMDQKIALRRNNQNPERPDANYLRT
LDSSIKRNTTVIKKLKTINDEQKDGLMDELKSVNLSKFVSEAVSYICEAKLRSADIQAAV
QVCSLLHQRYKDFSPCLIQGLLKVFLPGKSGDDLDTDKNSRAMKKRSTLKLLIELYFVGI
VEDASIFVNIIKDLTSLEHLKDREATQTNLSLLSSFVRQGRLFIGLRSHGHESYDEFFKD
LNVTADQKKFFKKALNSYYDAVSELLQSENASLRLMEAENAKVLSAKGELSDENTASYEK
LRKSFDQLLRGVSSLAEAIDLQPPVMPDDGNTTRVTTGTDVTPSSGKEPSVLEPIWDDDD
TKTFYESLPDLRAFVPAVLLGEAEQKLNEQHAKGREQSSESNAEQETEVHDNAQTSSATE
DQLEGKADDVAKDSEEKEKDKGKEAEKSKEKDLDRKTEKDKEKVRALDGGSLDNLLQRLP
GCVSRDLIDQLTVEFCYLNSKASRKKLVRALFSVPRTSLELLPYYSRMIATLSSCMKDVP
TMLLPMLEEEFNFLINKKDQINIETKIKNIRFIGELCKFKIAPAALVFSCLKACLDDFSH
HNIDVACNLLETCGRFLYRSPETTIRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKP
PERSARVSKVRPPLYQYIRKLLFSDLDKSSVEHVLRQLRKLPWVECQQYLVKCFLKVHKG
KYSQVHLIALLTAGLSRYHDDFAVAVVDEVLEEIRVGLELNDYAMQQRRLAHMRFLGELY
SYKHIDSSVVFETLYLIIMFGHGTYEQDVLDPPEDCFRIRLIITLLQTCGHYFTRGSSKR
KLDKFLLHFQRYIIMKGPLPLDIEFDIQDLFAELRPNMTRYSSIDELNSALAELEEHERV
ASVEKPESERHSDNESQKRQPHDDGRGSANGAEGNGKDHGEGADSESYSDSGSIGGHEDE
EDLLSEEKSNDASENEGDDEDDGMPVGSDEDEGVEVRQKVLQVDPKEQEDFDRELKALLQ
ESLESRKSEVRSRSSLNMKVPMNVLEGSKDARAVESESGEETVDEEGGNAGGGSKVRVKV
LMKKGHKQQTKQMFVPGDCSLVQSTKQQEAAELEEKQNIKRRILEYNEREEEEMNGGSSQ
MGNWGQGGSNTGSSIRSGGRGNWDGWIRGGARRHHAAGGFYQGYGRRR
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggagagcagtcagaccgagaacctcacagacactaaacaagatgacgatgcacggcaa
agcaaacaggaagatgaggaggctcgcattgaagaatacaaaaaactaatggatcaaaag
attgcccttcgccgaaacaatcaaaatcctgagagaccagatgcaaactacctgaggact
cttgactcaagtattaaacgaaatacaacagttataaagaagctcaaaacaataaatgat
gaacaaaaggatggattaatggatgagttgaaaagtgttaacttgagcaaatttgtcagt
gaagcagtttcttatatttgcgaggctaaacttcgttctgctgatatacaagctgcagtt
caggtttgctcattgcttcatcaaagatacaaggacttctctccttgtcttatacaaggt
ttactgaaggtcttcttgcctggtaaatctggagatgatttggatacagacaaaaactca
agagctatgaagaagagaagcactctgaaactactgattgaactgtactttgttggaata
gttgaagatgctagtatctttgtaaacattataaaagatcttacatcactggagcatttg
aaggaccgggaagcaactcagacaaatctgtctcttctctcttcctttgttcgtcaaggg
aggttatttatagggttacggtctcatggtcatgaatcttacgatgagttctttaaggac
ttaaatgttactgctgatcagaagaaattcttcaagaaagccttgaactcttactatgat
gctgtgtctgaactactacaatcagaaaatgcgtctcttcgtctgatggaggcagagaat
gcaaaagttttaagtgccaaaggtgaattaagtgatgagaacacagcttcatatgagaag
ctccgaaagtcttttgatcagttactacgtggtgtatcctcgttagctgaagctattgac
ttgcagcctccggtgatgccagatgatgggaacacaacaagggttactacgggaactgat
gtcaccccctcttcgggaaaagaaccatctgtgctggaacctatctgggatgatgacgat
accaagactttttatgaatctttacctgatctaagagcatttgtacctgctgtcttattg
ggagaggctgaacagaagttgaatgagcaacatgctaagggccgtgaacaatctagtgag
tcgaatgcggaacaagagactgaagtgcatgataatgctcagacttcttctgccactgaa
gatcaacttgagggaaaggcagatgatgtagctaaagatagtgaagaaaaagaaaaggat
aagggaaaagaggcagaaaaatcgaaagagaaggatttggacaggaaaactgaaaaagat
aaagagaaagtaagagccttggatggtggaagtttggacaacctgctacagaggttgcca
ggatgtgtgagccgtgatcttattgatcaattgacggttgagttttgctacctgaattct
aaagcaagccggaaaaaacttgtgcgggccttattcagtgttccaaggacttctctggag
cttttaccttattattctcgaatgattgccacattgtcatcatgtatgaaagatgtccct
actatgcttctccccatgcttgaagaggagttcaacttcttaataaataaaaaggatcag
atcaacattgaaacaaaaataaagaatataagatttattggagaattgtgcaaattcaaa
attgcaccagcggctcttgtttttagttgtttgaaggcgtgcctagatgatttcagtcat
cataatattgacgtggcctgcaaccttctcgagacatgcggacgttttttatatcgttca
cctgaaactacaatccgcatggctaacatgttggagatactgatgcgattgaaaaatgtt
aagaatctggatccgcgccacagtacacttgtagaaaatgcctactacctttgtaaacca
cctgaaagatctgcgagagtttcaaaagttcgcccacctttgtatcaatacataaggaag
ctgcttttctcagatctcgacaaatcaagtgttgagcatgttcttcgccagttacgaaag
ctaccttgggtagagtgccagcaataccttgtaaagtgctttctaaaggttcacaaggga
aagtacagccaagttcacctgattgctcttctcactgctgggcttagccgttatcatgat
gactttgctgttgcagtggtagatgaggttttagaagagataagggttgggttggagttg
aatgactatgcgatgcaacaaagacgacttgcacacatgcgatttcttggagagctgtac
agctacaagcatattgactcctcagttgtatttgagacattataccttatcattatgttt
ggtcatgggacttatgaacaagatgtgttggatccaccagaagattgcttcaggatcagg
ttgatcataacacttctgcagacttgtggccactatttcactagaggctcgtccaaaaga
aagcttgacaagttcttgctacattttcaaagatacattattatgaaaggccccttacca
cttgacatagagtttgacattcaggatttgtttgctgagctacgaccaaacatgaccaga
tattcatcaatagatgaacttaactctgcattagctgaactcgaagaacacgagcgtgtg
gcctcagtagagaaacctgagagtgaaaggcactcggacaatgaatctcagaaaaggcag
ccacatgatgatggcaggggttcagcgaatggagctgagggaaatggtaaggatcatgga
gaaggcgcagatagtgagagctattcagatagtggcagcattggtggtcatgaagatgaa
gaagatcttctgtctgaggagaaatcaaatgatgcatcggagaacgaaggtgatgatgag
gacgatgggatgcctgttggttctgatgaagatgagggtgttgaggttaggcaaaaggtc
ttgcaggttgatcccaaggagcaagaagactttgaccgagagctgaaagcccttctacag
gagagtttggagtcacgtaaatcggaggtgcgttccaggtccagtttgaacatgaaggta
ccaatgaatgtccttgaaggttcaaaggatgcaagggctgtggagtcagagagtggagaa
gaaactgtggatgaagagggtggtaatgctggtggtggcagcaaggtgcgtgttaaggtg
ctaatgaagaaagggcacaagcaacagacgaagcagatgttcgtccctggcgactgctct
cttgtacagagcacaaagcagcaagaagctgccgagcttgaggagaagcagaacattaag
cggaggatccttgaatacaacgagagggaggaggaagaaatgaatggcggatcgtcacaa
atggggaactggggccaaggagggagcaataccggcagcagtattagatcaggtgggcgt
ggcaattgggatggttggatcaggggaggcgctcggcgtcaccacgccgctggtggtttc
taccaaggatatggcaggagaagatga
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