Triticum aestivum (bread wheat): 123138391
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Entry
123138391 CDS
T07757
Name
(RefSeq) putative transcription elongation factor SPT5 homolog 1
KO
K15172
transcription elongation factor SPT5
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
123138391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123138391
03019 Messenger RNA biogenesis [BR:
taes03019
]
123138391
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
123138391
RNA polymerase I system
123138391
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
123138391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW1_SPT5
Spt5-NGN
KOW4_SPT5
KOW2_Spt5
KOW6_SPT51-2
KOW7_SPT5
KOWx_SPT5
KOW
KOW5_SPT5
Spt5_N
GPKOW_C
DUF6897
Ribosomal_L19
Motif
Other DBs
NCBI-GeneID:
123138391
NCBI-ProteinID:
XP_044414297
UniProt:
A0A3B6PSK8
LinkDB
All DBs
Position
6B:complement(632117293..632124408)
Genome browser
AA seq
1037 aa
AA seq
DB search
MSRRGREEEEEFEEVEEEEEADESEVEEERGEKRLRGGGGKGSGVASFIDDAASEDDDEE
EEEEEDDDDEDDDYEEGGRGRGRRPSKRKRSILIDDMAQVDDDDGEEEEEDGYEEGFIDD
DARADNPDEDVQRGSRRHFNPNPMDDADDMENLEEMLKWKYRTQSHSDFDEEGLTEVEQQ
ALLPSVNDPKLWMVKCAIGHERETALCLMQKFIDRQDLQIKSVVALEHLKNYIYVEAEKE
AHVKEACKGLRNIFSSAKILLVPTKEMTDVLSVTSKSADLSIDTWVRLKLGIYKGDLAKV
VEVDDVRQKVTVKVIPRLDLQALTDKLKGLKVAKKKSFIPPPRLFSTDEAREMNIPVERR
RDRDSGEYFEMVGALKFEDGFLRKIVSIKSISTQNVMPSLDELEKFGRVGDDVNEDVARL
STLSRKKGHFMKSDAVVVVKGDLKDIRGCVEKVEDSIVHIRPTPTQSDLPKTLAFSEKDL
CKYFNPGDHVKVVFGVQEGVTGMVVKVEGHVLTILSDTSKEHIRVFADHVVESSEVTTGL
TRIGDYELHDLVLLDNLSFGVIVRVESEAFQVLKGVPDKPEVVLVKLREIKYKIDRRTSA
KDSRNNTVSTKDIVRVIEGPCKGKQGPVEHIHKGICFIHDRHHLEHSGFICAKAQSCVLV
GGSVVNSSRMGVDTADPRLGAFRSPARILQSPGGLPPRGPYMNSGGRFGGGGRGGRGHDA
LVSRCIKIKSGPYKGYRGRVKEVNGALVRVELDSLMKIVTVKREDIADTANVGTPFRESR
YSLGSETPMHPSRTPLYPIQTPMREPGATPICDGSQTPMHNQAWAPMSPPRDNQEDGNRG
TWGAWGSSPAYQPGTPVARPFDAPTPGSGWESTSGTGFGDAPFNAPTPSAQPMTPIPASY
LPGTPGGQLMTPGNAGMGAMSPMIGDEGGSNWLLPDVCVNVSRGDGSTNGVVKEVLLDGS
CRVALGPSGSGDEVTALPDELEIIRPKKSDRVKIMNGSMRGVIGRLVGVDGSDGIVRVEN
PLDMKIVDLVILGKLAT
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgccgcggccgcgaggaggaggaggagttcgaggaggtagaggaggaggaggag
gccgacgagtcggaggtggaggaggagaggggcgaaaagcggttgcgcggcggcgggggg
aagggctcgggcgtcgcgagcttcatcgacgacgcggccagcgaggacgacgacgaggag
gaggaggaggaagaggatgacgacgacgaggacgacgactacgaggagggcggccgcggc
cgcggccgccggcccagcaagaggaagcggtcgatcctgatcgacgacatggcgcaggtc
gacgacgacgacggcgaggaggaggaggaagacgggtacgaggaaggttttattgatgat
gatgctcgggctgataatcctgacgaggatgtgcaaaggggttctagacgtcatttcaat
ccaaatccaatggatgatgcagatgatatggagaacttggaagagatgttaaaatggaaa
tatagaacgcaatcacactctgattttgatgaagagggtctaaccgaggttgaacagcaa
gctctcctgccatcagtgaatgatccaaagctctggatggtgaaatgtgcgattggacat
gagcgagagacagccctttgtctaatgcaaaagttcattgataggcaagatctccagatt
aagtccgtcgttgcattggaacacctaaagaattacatttatgttgaagcagagaaagaa
gcccatgtcaaggaggcttgcaaaggtctgcggaacatcttttcttcagcaaaaatactt
ctggttcctacaaaagaaatgactgatgttctctctgtcacgagtaagtctgctgatctt
tcaatagatacatgggtcaggttgaagcttggtatatataaaggggatcttgctaaggtt
gtcgaagttgatgatgtgcgccaaaaggttactgtgaaggtcattcctagattagattta
caagctttgacagataaattgaaaggtcttaaggttgcaaagaagaagtcgtttattcca
ccgccaaggttatttagtaccgacgaggcgagggagatgaacattcctgtagaacggagg
agagatagagattctggggaatactttgagatggttggcgctttaaaatttgaagatggt
ttcttgcgcaaaatagtctcgataaaatcaatcagcacacagaatgttatgccatcactt
gatgaattggagaaattcgggagagttggtgatgacgtgaatgaagatgtggctagattg
tccacactcagcaggaagaagggacattttatgaaaagcgatgctgtagttgttgttaaa
ggtgatctcaaggacataaggggctgtgtggagaaagtagaggattctattgttcacatc
cgaccaacaccgacacaatctgatcttccgaaaacacttgccttcagtgagaaagatctc
tgcaaatatttcaatcccggggaccatgtaaaagtggtttttggtgttcaagaaggtgtg
acaggcatggtagttaaagtggaaggacatgtcttgactattttatctgacacaagcaaa
gaacatatccgtgtgtttgcagatcatgttgtggagagttctgaggtcacgacggggctt
accagaattggtgattatgaattgcatgatcttgtccttcttgacaatttatcatttggt
gtgattgtaagggtggaaagcgaagcatttcaggttctcaaaggagtgcctgataaacct
gaagtggtgcttgtgaaactgagagaaataaaatacaaaatcgatcggcgcacatctgca
aaagatagcaggaataacacggtgtccactaaggatattgtcagggtcattgaggggcca
tgcaagggaaagcaaggacctgtggaacatatacacaaagggatatgttttatacatgac
cgccaccaccttgaacattcaggctttatctgtgcaaaagcacaatcttgtgtccttgtt
gggggatcggttgtcaacagcagcaggatgggtgttgatacagcagatccacggcttggt
gcttttagatctccagcaaggatcttgcaatctcctggagggcttccgccgagaggacct
tacatgaattctggtggaaggtttggaggaggtggtcgtggtggcagagggcatgatgcc
ttggtgagtagatgcatcaaaattaaatctggtccctacaaaggatatcgtggccgtgtt
aaagaagtgaatggtgcactcgtgcgtgtggagcttgattcacttatgaagattgtcaca
gttaagagagaggatattgctgacacagcgaatgttgggacaccattccgtgaatctcgt
tattcattgggcagtgaaacacctatgcacccatctcgaacgccattgtatcctattcaa
actccaatgcgagaacctggagcgacaccaatttgtgatggatcgcaaactcctatgcat
aatcaagcctgggcaccaatgagtccaccgagggataaccaggaagatggaaatcgtggc
acttggggcgcttgggggagcagtccagcttaccagccaggaactccagtagctaggcca
tttgatgcccccactcctggatcagggtgggaaagtacctctggaactggctttggtgat
gctccattcaacgctccaacacctagtgctcaaccaatgaccccaattcctgcctcttat
ttgcctggaacccctggtggccagctaatgaccccagggaatgctggaatgggtgcaatg
tctccaatgataggggatgagggcggcagtaattggctcttgccagatgtttgcgtcaat
gtgtccagaggagatggttccaccaatggtgtggtgaaggaagtactcctggatggatct
tgccgtgtcgcacttgggccatcagggagtggggatgaagtaacagctcttccagacgag
ctcgagatcatcaggccgaagaagagcgacagggtcaagataatgaatggcagcatgcgt
ggagttataggaagactggtaggagtcgacgggtctgatgggattgtccgggtggaaaac
ccgcttgacatgaaaatagtagacctggtgattttgggcaaactagcaacttga
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integrated database retrieval system
