Triticum aestivum (bread wheat): 123138448
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Entry
123138448 CDS
T07757
Name
(RefSeq) THO complex subunit 5A-like isoform X1
KO
K13174
THO complex subunit 5
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03013
Nucleocytoplasmic transport
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123138448
09122 Translation
03013 Nucleocytoplasmic transport
123138448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123138448
03041 Spliceosome [BR:
taes03041
]
123138448
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
123138448
Spliceosome [BR:
taes03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123138448
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
123138448
NCBI-ProteinID:
XP_044414361
LinkDB
All DBs
Position
6B:complement(642502960..642507994)
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AA seq
801 aa
AA seq
DB search
MAKVPAAEAMDVEAPARPPSATTAPKPRSPHDLLAETRASVEEVAARILAIKKDGAPKSE
LRELVAQMSLLLITLRQVNREILMEEDKVKGETEAAKAPVDSTTLRLHNLLYEKNHYVKA
IRSCLDFQTKHPGIELVPEEEFHRAAPADIRDKTLAADTAHDLMLKRLNFELVQRKELCE
RHEKLEQQKNSLLGTIANQKKFLSSLPSHLKSLKKASLPVQQQLGMLHTKKLKQHHAAEL
LPSPLYITYTQLLGQKEAFGENIEVEVNGSTKDAQTFAQQQAKQEMAGTLANDDNNRMDD
DAIDEEEDAQRRRSRSRKSSKEASNPALAYQLHPLKVVLHVYDTEDSGTKRRKLITLRFE
YLAKLNVVCVGSEDSDGMDSNILCNLFPDDTGLELPHQMAKLYAGETPNFSEKDSRPYKW
AQHLAGIDFLPEVPQSVGDSSNRASRNADLSSGLALYRQQNRAQTILQRIRSRKIAQMAL
TWQLNYLTKLRWPQIEHENTPWASRTPSCSMHSWSLTGVFPEPSARSALVVSGPAGSVDS
DLERRSVTNGQETEGNREDGELPIVVHSEDMPDDSKVSQAEVSPEVLNHSRGLSLISKGS
APSKLSISHSFGRNEDDLDFLMDSDSELEELACADQETEQGSLTIDKSWEDYASREFTMV
LSKTLKNGAKIMLEAKIKISMEYPLRPPLFRLQLVSEKTEDLKWHNDLRAMEAEVNLHIL
RILPRSNEDYILTHQVLCLAMLFDMHLDEDHEKRKVTSVIDVGLCKPVSGTMLTRSVRGR
DRRQTIYWREKPSFGTGTNMV
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggtgccggcggcggaagccatggacgtcgaggcaccggcgcgtccgcccagc
gccaccaccgcgccaaagccacgctccccccacgacctcctcgccgagacccgcgcctcc
gtcgaggaggtcgccgcccgcatactcgccatcaagaaggacggcgcccccaagtccgag
ctccgtgagctcgtcgcgcagatgtccctcctcctcatcacgctccgccaggtgaacagg
gagatactgatggaggaggataaggtgaagggggagacggaggcggcgaaggcgcccgtg
gactccacgacgctgaggctgcacaacctgctgtacgagaagaaccactacgtcaaggcc
atcaggtcgtgcctcgacttccagacgaagcacccggggatagagctcgtgcccgaggag
gagttccaccgcgccgcgccggctgacatccgcgacaagacgctcgccgctgacaccgcc
cacgacctcatgctcaagcgcctcaacttcgagctcgtccagcgtaaagagctatgtgag
cgacatgagaaattggaacaacagaagaacagtttgctggggacaattgcaaatcagaag
aagttcctctcaagcctcccatcgcatttgaaatcactgaagaaagcatcattgccagtg
cagcagcagcttgggatgctgcataccaagaaactaaagcagcaccatgcagctgagttg
ctcccatctcctctttatataacttacacccagttgttaggacagaaagaagcatttggc
gagaatattgaagtggaggtaaatggaagcacaaaggacgctcaaacttttgctcaacag
caagccaagcaggaaatggcaggcactttggcaaacgatgataataataggatggatgac
gatgcaattgatgaggaagaagatgctcagagaagaagatcaaggtctaggaagagttca
aaggaagctagtaatcctgcattagcatatcaacttcatccactcaaagttgttctccat
gtatatgatactgaagattctggaaccaagcgtcgtaagctcatcactttgaggtttgaa
tacttggcaaagttgaatgttgtctgtgttggatctgaagattcagatggaatggacagc
aatatcctgtgcaacctatttccagatgacactggcttagagctgcctcatcagatggct
aagctttatgccggggagactccaaattttagcgaaaaggattcgcgtccatacaagtgg
gcacagcatctagctggtatagatttcctcccggaggttcctcaatctgttggggatagt
tctaacagagcgtcgagaaatgctgatttgtcatctgggcttgcactataccgtcagcag
aatcgtgcacagactattttgcagagaatccgctctcggaaaattgcacaaatggctctc
acgtggcaacttaattatttaactaagctgaggtggcctcaaatagaacacgagaataca
ccatgggcatcacgcaccccatcgtgtagtatgcacagttggtcattgacaggagttttt
cctgagccttcggctcgttctgctttagtggtgagtgggcctgcaggaagtgttgacagt
gatttggagagaagatctgtgacaaatgggcaagaaaccgagggtaacagagaggatggt
gagcttccaattgtggttcactctgaagatatgccagatgattctaaagtatcacaggca
gaggtctcacctgaagttctaaaccattctagaggcttatctcttatatcaaagggctct
gcaccatctaagctaagcatctcacacagttttggtagaaatgaggatgatcttgatttc
ttaatggacagtgacagtgagttggaggagctggcatgtgctgaccaagaaactgagcaa
ggtagcctcactatagataaatcctgggaggattatgcttccagagagttcaccatggtc
ttgagtaaaactttgaagaatggtgcaaaaatcatgctggaagccaagattaaaattagc
atggagtatcctcttaggccaccacttttcagattgcagctggtttctgaaaagaccgaa
gatttaaaatggcacaatgatcttcgtgcaatggaagctgaggtgaatcttcacatcctc
cgaattcttcctcggtcgaacgaggactatatattaacccaccaagttctgtgcctggct
atgttgtttgatatgcatttggacgaggatcacgagaaaaggaaagttacttcagtgatt
gatgttgggctgtgcaaaccagtcagtggaaccatgctcactagatcagtcagggggaga
gaccggagacagaccatctattggcgagagaaaccttctttcggtactggaactaacatg
gtctga
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integrated database retrieval system
