Triticum aestivum (bread wheat): 123138475
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Entry
123138475 CDS
T07757
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03030
DNA replication
taes03420
Nucleotide excision repair
taes03430
Mismatch repair
taes03440
Homologous recombination
taes03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123138475
03420 Nucleotide excision repair
123138475
03430 Mismatch repair
123138475
03440 Homologous recombination
123138475
03460 Fanconi anemia pathway
123138475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
taes03000
]
123138475
03032 DNA replication proteins [BR:
taes03032
]
123138475
03400 DNA repair and recombination proteins [BR:
taes03400
]
123138475
Transcription factors [BR:
taes03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
123138475
DNA replication proteins [BR:
taes03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
123138475
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
123138475
MMR (mismatch excision repair)
123138475
DSBR (double strand breaks repair)
HR (homologous recombination)
123138475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
CDC24_OB3
TMEM219
Motif
Other DBs
NCBI-GeneID:
123138475
NCBI-ProteinID:
XP_044414387
LinkDB
All DBs
Position
6B:complement(647362792..647366178)
Genome browser
AA seq
654 aa
AA seq
DB search
MASARLAPNGVGAALAGDTNLRPTVQVVNLRCVNVDGKGTPRSDRWRGLVSDGAETCPAM
FAGQLSDLARSGLIRGGSVVQLDEYVINMVGGRRVIVVLNLTVLLAECDIIGNPVITPES
ESSNQNNPRVEQFNGTRQYGLAAGNPSPTRPNGNVPVFQPSVAGNSLNTPTRLSDKSPVF
QPTAQPSYRPAPSYKNQGAIAKNEAPARIIPISSLNPYQGRWAIKGRVTAKGDIRRYHNA
KGEGKVFNFDLLDSDGGEIRVACFNTQLDRFYEVVEVGKVYVVSRGNLKPVQRNYNHLNS
EWEIMLERDSSVDLCPDENSSIPSQQYNFRPISEIEDTPTGTILDIIGVAISVSPSTTIQ
KKNGTETLKRIIGLKDMSGRSVDLTMWGDFCNREGSQLQEMVERGVFPVLGVKTGRVNDF
NGKCVGTISSSQLLIDPDLSEAHTLRQWFDGGGRDASTQSISRDHTPAASRNEVRMTVAK
IKDDGLGMGDKPDWVTVKASIIFFKSDNFCYTACPTKEGDRQCNKKVTKGTSGLWVCDKC
DKEFPECDYRYLLQLQIQDHSGTTWVTAFQETAQELLGCSALELVTYKENGDPRFAETML
SCLFKDYLLRLKVKEETYSDERRVKNTLVKVERFDPAAESRYLLDLLSRSVASY
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcgaggctggccccgaacggcgtgggggcggcgctggcgggggacacgaac
ctcaggcccaccgtgcaggtcgtcaacctgcgctgcgtcaacgtcgacggcaagggcacg
ccccggagcgaccggtggcgcggcctcgtctccgacggcgccgagacctgtcccgcgatg
ttcgccggccagctcagcgacctcgcgcgctccgggctcatccgcggcggctccgtcgtg
cagctcgacgagtacgtcatcaacatggtcggcggcagaagggttatcgtcgttctgaat
ttgacagttcttctcgcggagtgtgacatcattggcaatccagtgattactccagaaagt
gaatcttctaatcaaaacaacccaagagtggagcaatttaacggaacacgtcaatatggt
ttggcggcaggaaacccaagtcccacaaggcccaatggcaatgttccagtcttccaacct
tcggtggcaggaaactccttgaacacacccaccaggctcagtgacaaatctccagtcttc
cagccaacagcacagccatcttatcgtcctgcacccagttacaaaaatcaaggagcaatt
gcgaaaaatgaagcccctgctagaataatccccatatcttctttaaatccttatcagggc
cgctgggctatcaagggtagagttactgcaaagggagacatccgccggtaccacaatgca
aaaggtgaaggcaaagtgttcaactttgacctgcttgattctgatgggggtgagatacgg
gtggcatgtttcaacactcaacttgatcgcttctatgaagttgtggaagttggtaaggtc
tatgtggtatcaagaggaaacttgaaacctgtacagaggaactataaccatctgaacagc
gagtgggagattatgttggagagagattcatcagtggatctttgtcctgatgagaacagc
tcaattccctctcagcagtataacttcagaccaatcagtgaaattgaggatactccgacc
ggtactatacttgatatcataggtgttgctatctctgtcagtccttccacaacaatacag
aagaaaaatggcacggaaactctaaaaagaattattggcctgaaggatatgtctggtcga
agtgttgatctaaccatgtggggtgacttttgcaacagagaaggctcacagctgcaagaa
atggttgaacgcggggtcttccccgtgttgggtgtcaaaacaggaagagtgaatgatttc
aatggcaagtgtgtcggcacaatttcttcctctcaactcctcatagaccctgatctctct
gaagctcatactctgaggcaatggttcgacggtggaggaagggatgcttctactcagtcc
atatcgagggatcacactcctgcagcatcaaggaacgaggtccgaatgacagttgctaaa
atcaaggacgatggtcttggaatgggagacaaacctgattgggttacggtgaaagcctcc
attatattcttcaagagcgacaacttctgctacacagcttgccctaccaaggaaggtgac
cggcagtgcaataagaaagtgacaaaggggacctctggcttgtgggtgtgtgacaaatgc
gacaaggagtttccagagtgtgactacaggtatcttctgcagcttcagattcaagatcac
tcgggaacaacttgggtgacagcgtttcaggagaccgcgcaagagttactaggctgctcg
gcgctagagctcgtcacatacaaagagaatggagaccctcgttttgcagagaccatgctc
agctgtttgttcaaggattacctgctcaggctgaaagtcaaagaagaaacgtacagcgac
gagcggagagtgaagaacacattggtcaaagtggagaggtttgatcctgctgccgaaagt
agatatctgctcgatttactttcaaggtcggtggcatcatattga
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