Triticum aestivum (bread wheat): 123138811
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Entry
123138811 CDS
T07757
Name
(RefSeq) probable rhamnogalacturonate lyase C
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
123138811
Enzymes [BR:
taes01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
123138811
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
Motif
Other DBs
NCBI-GeneID:
123138811
NCBI-ProteinID:
XP_044414615
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Position
6B:59706903..59710980
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AA seq
714 aa
AA seq
DB search
MSTWAVMAFLLSVIAAASQLLPVARAAAPGTLSAGVKLQEDQHQVVVDNGIVQVAVSKPQ
GQIIGVRYVDDTNLLYFNNNEISGGYWDVVWNFPGSGYPTGMNDMLDGTEFRVVSASEEQ
VELSFMRTYDPSRLNSVPLNVDKRLVMLRGGSGFYCYAIFEHAGGWPAVDVSEARLVFKL
DPTTFNYMAVSDGIQRFMPGAADRDAPRAVPLAYKEAVLLVHPSETQFAGEVDDKYQYSM
DNKDNRVHGWIAGAGGGGGGGGPVTVGFWVVTPSNEFKSGGPLKRELTSHIGPTSLTMFM
GTHYIGNDMVAKIEAGEHWKKVMGPVFIYLNSNRPERGGFHELWADAKAQAEVEASKWPY
SFPESPDFHKAGERGSVTGRLLVRDRYTSGGEDVPARLAYVGLAARGQPGSWAPESKGYQ
FWTRASATGGSFAIGNVRAGEYNLYAWVPGVLGDYMRTDPVTVVPGVAIALGDLVFEPPR
SGPTLWEIGVPDRSAAEFFVPDPNPRYLSKLFVARDKYRQYGLWERYAELYPTGDPVFTI
GVSNPSEDWFFAHVTRKSGNGENAPTTRRIRFDLPRVAAGGTYTLRMALAAAHMSKLKVQ
VNGATGKGSAGGVFVTPEFGDDNAIARHGEHGRWWSFEFPIDGRLLVQGENTISVTQARA
FSVFLGVMYDYVRLEGPSGWDSGVTSSAGLGKILPLGLLYGLVVLPTLIFLLSK
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtgggcggtcatggcgttcctgctctctgtcattgcggcggcgtcgcagctg
ttgcccgtggcgcgcgcggccgctccagggaccctaagcgccggcgttaagctgcaggaa
gatcagcaccaggtggtggtggacaacggtattgtgcaggtggcggtgtccaagccgcag
ggccagatcatcggcgtccgttatgtcgacgacactaacctcctctacttcaacaacaat
gagatatcaggcgggtactgggatgtagtttggaactttccaggatcgggatatcccacg
ggcatgaacgacatgttggacggtacagagttcagggtggtatctgcgagtgaggagcaa
gtggagctctccttcatgagaacctacgacccatcacgcctcaacagcgtcccgctcaac
gtcgacaagaggctggtgatgctgagaggcggctccgggttctactgctacgccatcttc
gagcacgctggcggctggccggccgtcgacgtctccgaggcccggctcgtcttcaagctc
gaccccacgacgttcaactacatggccgtctcagacgggatccagaggttcatgccaggg
gcggcggaccgggacgcgccccgggccgtgccgctcgcgtacaaggaggccgtgctgctc
gtgcacccgtcggagacgcagtttgctggggaggtggacgacaagtaccagtactcgatg
gacaacaaggacaaccgcgtccacggatggatcgccggtgccggtggtggcggcggcggc
ggcggcccggtgaccgtggggttctgggtggtcacccccagcaacgagttcaagagcggc
ggccccctcaagcgcgagctcacctcccacatcggccccacctcgttgactatgttcatg
gggactcattacatcgggaacgatatggtggcgaagatcgaggccggcgagcactggaag
aaggtcatggggccggtgttcatctacctcaactccaaccggccagagaggggaggcttc
cacgagctctgggcggacgccaaggcgcaggcggaggtcgaggcgagcaaatggccgtac
agcttcccggagtcgccggacttccacaaggcaggcgagaggggctcggtcaccggtcgc
ttgctggtcagagacaggtacacgagcggcggcgaggacgtgcccgcccggctggcctac
gtcggcctcgccgctcggggacagcccggctcctgggcgccggagagcaagggttaccag
ttctggacgagggcgtcggcgaccggcggcagcttcgccatcggcaacgtccgggcagga
gagtacaacctctacgcctgggtccccggggtcctcggcgactacatgcgcacggatccg
gtaacggtggtgcccggcgtcgccattgccctcggcgacctcgtgttcgagccgccgcga
tcggggccgacgctgtgggagatcggcgtgccagaccggagcgccgccgagttcttcgtc
cctgatcccaaccccaggtacctcagcaagctcttcgtcgccagggacaagtacaggcag
tacgggctgtgggagcggtacgccgagctgtaccccacgggcgaccccgtcttcaccata
ggcgtgagcaacccctccgaagactggttcttcgcgcatgtcacaaggaagagtggcaac
ggcgagaacgcgccgacgacgcggcggatccggttcgacctgccccgcgtcgccgccggt
ggcacctacacgctgcgcatggccctcgcggcggcgcacatgtccaagctgaaggtgcag
gtgaacggggcgacggggaaggggtcggccgggggagtgttcgtgacgcccgagttcggc
gacgacaacgcgatcgcgcggcacggcgagcacggcaggtggtggagcttcgagttcccg
atcgatgggcgcctgctcgtgcaaggggagaacaccatcagcgtcacgcaggcgagggcg
ttcagcgtgttcctgggggtcatgtacgattacgtccggctggaagggccgtccggttgg
gattctggagtcacaagtagtgctggtctaggcaaaatcttgcctctcggtttgctatat
gggcttgtcgtgctaccaacattgatatttctgctaagcaagtga
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