Triticum aestivum (bread wheat): 123139067
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Entry
123139067 CDS
T07757
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123139067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123139067
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
123139067
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
123139067
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Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
123139067
NCBI-ProteinID:
XP_044414818
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All DBs
Position
6B:179247683..179274444
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AA seq
436 aa
AA seq
DB search
MPPRLCFLSSRGRPLVPVALTAPIAKARAPAFVDRASASRSPQPALPQPPPPNGLKPMGE
LPPLFLVNFDKRSYLSTKRNLCSWELNQAMGGMYRTNFRRRPAATPTTSDPSSFSSPAIG
DLHLRLNQTQRVRLEAALHELQTLAPAAAAAAVTFADNIPFNPEDTILRGHGTSDQDGEV
VATVCGVVERVQNLVCVRTLRARYKPQKGDIIIGRVSEIASKRWRLETNFSQGAVLMLSS
MNLPDGIQRRRTDVDELNMRSILEENDLVCAEVHHIQHDGSLDLQPRSQKYGKLQRGQLL
TVPAYLVKRRKQHFHHLEQYDADLILGCNGFIWVGEHVVADEETNANEDQHKLSMEVEAF
TPLETRRHICRLANAVHVLSALGFTLTVELIIQTAEASLSSHVEINDMLGAEFYVQTAER
EAKRRADLSRRMNGPR
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgcggctgtgcttcctgtcgagcagaggacgcccgctcgtccctgtcgctttg
accgcgccaatcgccaaggcccgagcgcccgctttcgttgaccgcgcctctgcctccaga
tccccccagcccgcactgcctcagccgcctccaccgaacgggctgaagcccatgggtgag
ctgccccccctgttcctggtgaattttgataagagatcttatctttccacaaagagaaac
ctttgcagctgggaactaaaccaagctatgggcggtatgtacaggactaattttcgccgt
cgaccagcggcaacgccgacaacctccgacccttcctccttctcctccccggcgatcgga
gacctccacctacgactgaaccagacacagagggtccgcctcgaggccgcactccacgag
ctccagaccctcgcccccgccgccgccgccgccgccgtcaccttcgcggacaacatcccc
ttcaaccccgaggacaccatcctcagggggcatggcacgtctgatcaggacggggaggtt
gtggcgacggtgtgcggcgtggtggagcgggtccaaaatctcgtctgcgtgaggacgctc
cgcgcaaggtataagccacagaaaggggatatcattattggccgtgtcagtgagattgct
tctaagcgctggaggttggagacaaactttagccaaggtgctgttttgatgctttcttct
atgaatttgcctgatggaatccagagacggagaactgatgttgatgagcttaatatgcgg
agtatacttgaagaaaatgaccttgtttgtgctgaagttcatcatatccaacacgatgga
tctcttgacctacagccaaggagtcagaaatatggaaagcttcagaggggtcaattgctc
acagtacctgcctatttggtaaaacggcgaaagcagcatttccatcatcttgagcaatat
gatgccgatttgattctcggttgcaatggattcatctgggtcggcgagcatgtcgtggcg
gatgaagagactaatgcgaacgaagatcaacataagttgagcatggaagtggaggctttt
accccactagaaactagaaggcacatttgccggcttgccaatgccgtgcacgtgctttcg
gcccttggattcacccttactgtcgaactgataatccagaccgctgaagcaagcctatca
tcacacgtcgagataaacgacatgctcggagctgaattttatgtccagacagcggagaga
gaggccaagcgtcgagccgatctctcgagaaggatgaatgggccaaggtaa
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