KEGG   Triticum aestivum (bread wheat): 123143340
Entry
123143340         CDS       T07757                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4-like isoform X1
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
taes  Triticum aestivum (bread wheat)
Pathway
taes03020  RNA polymerase
taes03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:taes00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    123143340
  09124 Replication and repair
   03420 Nucleotide excision repair
    123143340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:taes03021]
    123143340
   03400 DNA repair and recombination proteins [BR:taes03400]
    123143340
Transcription machinery [BR:taes03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     123143340
DNA repair and recombination proteins [BR:taes03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      123143340
SSDB
Motif
Pfam: RNA_pol_Rpb4 TFIIF_alpha
Other DBs
NCBI-GeneID: 123143340
NCBI-ProteinID: XP_044418160
UniProt: A0A3B6QC18
LinkDB
Position
6D:complement(38096955..38102513)
AA seq 231 aa
MANRGGKGSYPPSKSGAPNGRQMVLISDDSDSDSDSDSDDFFEEEAPPTHSKSNGKASSD
SLKTGGKASSFSNGEGSKGGKAFSAGKGGKGSASNAKPAMSDAELKLQLDMSPNSILLTN
CEAAEMLQKIQGHMAILSEDPKIKIPESFDKAFQYAKEGNHFTSAKLVKEILEPLKDYGV
NDGEICMIANIGPETIEEVYALIPSLKATRSINEGKIAEALTALANIKASK
NT seq 696 nt   +upstreamnt  +downstreamnt
atggcgaacaggggagggaaggggtcgtaccccccgtccaagtcaggagcaccgaacgga
aggcagatggttctgatttctgatgattctgattctgattctgattctgattctgatgat
tttttcgaagaagaggctccccccacacactccaagtcaaatgggaaagcttcatctgat
agcctaaaaactggtggaaaggcttcatccttttctaatggagaaggtagcaaaggaggg
aaggcatttagtgctgggaagggtgggaagggctccgcatcaaatgcaaagcctgcaatg
tctgatgcagaactaaagcttcagcttgatatgtctccaaattctatattgttaacgaac
tgtgaagcagcagaaatgttgcagaaaattcagggacatatggctatcttatcagaggat
ccgaagataaaaattcccgagtcgtttgacaaggcctttcaatatgcaaaagaaggaaat
cacttcacctccgcgaagttggtgaaagaaatcctggaaccccttaaagactatggtgtt
aatgatggcgagatatgcatgattgcgaacattgggcctgagaccattgaagaggtttat
gcactcataccgtctctcaaggccactaggtcgatcaatgaaggcaagatcgcagaggcc
cttaccgccctcgctaacataaaagcctccaagtga

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