Triticum aestivum (bread wheat): 123143963
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Entry
123143963 CDS
T07757
Name
(RefSeq) zinc finger CCCH domain-containing protein 45-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123143963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123143963
03019 Messenger RNA biogenesis [BR:
taes03019
]
123143963
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123143963
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123143963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Torus
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
123143963
NCBI-ProteinID:
XP_044418890
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All DBs
Position
6D:complement(113038417..113050899)
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AA seq
404 aa
AA seq
DB search
MDGDGSLRFDFEDDVDAFSAGSGFASSEAPIVAVGGPSRGRGHGSIEMDGDEDSLRFDFE
DGLDAAGAGTESSAWPFEAPIPAAGGPSHGPVSGSIQMDGDEGSLRFDIEDGLDAAGAGT
GSLAWSFEAPIPAAGGPSYGPGSGSIQMDGDEDSLHFDIEDYLDAAGAGTGSSVWSFEAP
IPAAGGPSHGPDSGSIQMDGDEGSLRFDLDAVGAGSGSDEEIPECIMFSVGFCLNGPNCK
CMHVKLPGPPPVQEVLQKFQQTNAYNYGSSSTTYQPRDNNCKQKAKPQVQHESVLENQNL
AVNATLVAQQPAAQHVQTENPPPHLQQQQNAQVQGVHNGSSIQKLPQLQAHFHKGNQGTW
LLNFATRRIWILVQWGVFAPQKGLMRLNLTKHVHGECHFNILHL
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgacggcagcctccgcttcgacttcgaggacgacgtcgacgccttcagcgct
ggatccgggttcgcgtcctccgaagcccccatcgtcgccgtgggagggccgtcccgtggc
cgcggccacggaagcatcgaaatggatggcgacgaggacagcctccgcttcgacttcgag
gacggcctcgacgcggccggcgctggtaccgaatcctcggcctggcccttcgaagccccc
atccccgccgctggagggccgtcccatggccctgtcagcggaagcatccaaatggacggc
gacgagggcagcctccgcttcgacatcgaggacggcctcgacgcggccggcgctggcacc
ggatccttggcctggtccttcgaagcccccatccccgccgctggagggccgtcctatggc
cctggcagcggaagcatccaaatggacggcgacgaggacagcctccacttcgacatcgag
gactacctcgacgcggccggcgctggcaccggatcctcggtctggtccttcgaagccccc
atccccgccgctggagggccgtcccatggccctgacagcggaagcatccaaatggacggc
gacgagggcagcctccgcttcgacctcgacgccgtcggtgctggatccggctccgacgag
gagatcccggagtgtataatgtttagcgtgggcttttgccttaatggacctaattgcaag
tgcatgcatgttaagctacctgggccgcctcctgttcaagaagtcctccagaagtttcaa
cagacgaatgcctataactatggttcatcaagcacaacttatcagcctagagacaataac
tgtaagcagaaggcgaaacctcaagtccagcatgagtcagtgctggagaatcaaaatttg
gctgtaaatgctactcttgtagcgcaacaacctgctgctcagcatgtgcagacagaaaat
ccaccacctcatctacagcagcagcaaaatgctcaggttcaaggtgtccataatggttca
tctatccaaaagctaccacaactgcaagcccacttccacaagggcaatcaaggtacttgg
ttattaaattttgcaaccaggagaatctggattttggttcagtggggtgtttttgcccct
caaaaaggattaatgaggttgaacttgacgaagcatgtccatggagagtgtcatttcaat
attctccatctctag
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integrated database retrieval system
