Triticum aestivum (bread wheat): 123144193
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Entry
123144193 CDS
T07757
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123144193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123144193
03009 Ribosome biogenesis [BR:
taes03009
]
123144193
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123144193
Spliceosome [BR:
taes03041
]
Complex A
U2 snRNP components
U2 related factors
123144193
Complex B
123144193
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
123144193
Ribosome biogenesis [BR:
taes03009
]
Eukaryotic type
90S particles
Helicases
123144193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
AAA_19
Helicase_C
Flavi_DEAD
HA2_C
AAA_22
HA2_N
ResIII
nSTAND3
Motif
Other DBs
NCBI-GeneID:
123144193
NCBI-ProteinID:
XP_044419183
LinkDB
All DBs
Position
1B:636188112..636201229
Genome browser
AA seq
689 aa
AA seq
DB search
MDEGRKRKALDGMNPWTGRPYSSRYYEMLENRRALPVWRHKGEFLRLLGLHKVVIVVGDS
GGGNTTQVPQIVLQAWNGRVACTQPWRVAAMTAAQRVADEMDVTLGEQVGYTVPLEECGN
HNTVIMYMKDSMLLREAAEDPLFQKYKVVIVDEAHERTLATDILSVILKNAISKRKDLRL
VVMSATDNTQENNFSIHFNNAPILMVPGRQLHPFECIYLPEPMFNYVEVAIITVVQIHTT
RPAGDIIVFLPREPQVESVCSELSRELQGRDDVGPFCIVPLHDNLPLEKQSKVFEPAPVV
WRVGCRPRKIVVSTKLAETSVIIHGIVYVIDAGLSNCRIHNPDTGVEALFVSDISQQSAV
RRALIAGRTQAGMCFRLYTEDIFQEELPLETYPESLTLNLSSIALGMKNLGIPDLMSFKY
MDSASPARVSVARALRDLYHLRAVNPEYNLEPLGEVMNSFPLDPQMSAMIIASPDYHCSN
EIVSLSAMLLDRDSEWCKMNFIDAQVRNYAYNLRQKLVGIMRGLNIPLLSPASDSPWFPN
NVKLAMLSGYFMQVAHRERFGYSVMLKDDNQVLDLDRTTFLNRRPEWVIYDEIHSNIART
VTDVQTEMLLMIARDYYDLRNIPRCAMKTAIERAHVFGLSRSGYQGLAEMTQVELQNFLE
GEGMQWQTRISIPQAPAADEQGEGPPSPQ
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggggcgaaagcgcaaggcgctcgacggcatgaatccgtggactgggcggcct
tactcctctcgctactacgaaatgctggagaatcggcgcgccctcccggtgtggaggcat
aagggagagttcctgcgcctcttaggcctccacaaagtcgttatcgtcgtcggggattcg
ggaggtggcaacaccactcaggtccctcagattgttctgcaggcatggaatggcagggtg
gcctgtacccagccttggagggtcgctgcaatgacggccgctcaacgcgtcgcagatgaa
atggatgtcactcttggtgaacaggttggctacacggtacctttagaagagtgcggcaac
cacaatactgtgatcatgtacatgaaagattctatgctcctgagagaagctgcagaagat
cccctgtttcagaagtacaaggtggttattgtggatgaagctcatgaacgtacattggca
actgatattctatctgtgatcctgaaaaatgctatcagcaaaaggaaggacttgaggctg
gttgtcatgagtgccacagacaacactcaagagaataacttcagcatacacttcaacaat
gcaccgattctgatggtgcctggtaggcaattgcatccgttcgaatgcatctacctgcca
gaaccaatgttcaactatgtggaggttgcaatcattacagtagtacagatacacactact
cggcctgctggtgacatcattgtctttctcccaagggaaccccaagttgagtctgtttgt
tcagaacttagcagggaacttcagggaagggacgacgttggtccattttgcattgtgcct
ctccatgataacctaccattggaaaagcagtctaaggtttttgaacctgctccagttgta
tggagagtgggttgtcgtccaaggaaaatcgtcgtttcaacaaaattggccgagacctct
gtcataattcatggaatagtctatgttattgatgcagggctttccaactgcagaattcac
aacccagacacaggagtagaagctctgtttgtgtcagatatttctcagcagagtgcagtt
cggagagctcttattgctggaagaacgcaggcaggaatgtgcttcagattgtacaccgaa
gatattttccaagaggaattaccactcgagacctacccagaaagtttaacactgaacctg
tcaagcatagctcttggtatgaagaatcttggaattcctgacctcatgagttttaagtat
atggattctgcttcacctgcacgtgtatctgtagcaagggccttgagagacttgtaccat
ttaagagcagtcaaccctgaatataacttagaacccttgggtgaagtgatgaactcattt
cccctagaccctcagatgtcagcaatgataattgccagtccagattaccactgctcaaat
gagattgtgtctctatctgcaatgctgttagatcgggattcagaatggtgtaagatgaac
ttcatcgatgctcaagtcaggaactatgcttacaatcttagacaaaagcttgttggaatc
atgagaggattgaatatcccactgttgagtccagcctccgatagtccttggttccccaac
aatgttaaattggccatgctatcagggtactttatgcaggtagctcacagagaaagattt
ggatactctgtgatgctgaaagatgataaccaggtattggatttggacaggacaaccttc
ctgaaccgcaggcctgaatgggttatttacgatgaaatccattcaaacatagctcgcaca
gttactgatgtccaaacagaaatgctactgatgatagctcgcgactattacgacctaagg
aacattccgcgctgtgccatgaagactgctattgagagggcgcacgtctttgggctgtct
cgaagtggctatcaaggcttagctgagatgactcaagtcgaactgcaaaattttcttgag
ggtgagggtatgcagtggcagaccaggatctcaattccacaagcaccagcagctgacgag
cagggggaaggccccccttctcctcaatga
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