Triticum aestivum (bread wheat): 123144212
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Entry
123144212 CDS
T07757
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123144212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123144212
03009 Ribosome biogenesis [BR:
taes03009
]
123144212
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123144212
Spliceosome [BR:
taes03041
]
Complex A
U2 snRNP components
U2 related factors
123144212
Complex B
123144212
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
123144212
Ribosome biogenesis [BR:
taes03009
]
Eukaryotic type
90S particles
Helicases
123144212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_22
Helicase_C
nSTAND3
Motif
Other DBs
NCBI-GeneID:
123144212
NCBI-ProteinID:
XP_044419207
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All DBs
Position
1B:636554847..636563308
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AA seq
395 aa
AA seq
DB search
MVKGRKRKADSINNPWNNRPYSKRYYELFDRRHTLPVWQQKDEFIRTLLDNQIIILAGDA
GSGSTTQIPHFLFEALGFGNNTVIAYALPSRIGAMSIAQRVAEEMDVSIGHEVGYKTRFE
ASTSNITALKFLTDDVLFREALMDPLLTKYSVIVLGEVHKFRLSTDVLCTVLKKALEERP
KMKLVLMSAIDEEATFQCYFPSAIIMKLPGPIYPVTIHYAPKEVGSYVKAAIDISLQIHS
NEPAGAILIFLCAQAEVEYACWKIRQKLNASRDLVGAVDIVPIYSTISLEMQQRLFQPPP
IIWNVEAPPGRTIFVSTGIAEASLTLDGIVYVIDSGFSYQKICDGDMWAEKHILAPIPKA
CASQRAGLAGRKQPGRCYRLYTEEWFQELSQQVYP
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggggcggaaacgcaaggcggactcaatcaacaatccatggaacaatcggcca
tactccaagagatattatgagctatttgacaggcgccatacccttcccgtgtggcagcaa
aaagatgaattcatacgcaccctactggacaaccagatcattatccttgctggagatgcc
gggagcggcagtactacccagatcccacactttctgtttgaggctttaggatttggcaac
aacactgtaattgcctacgccctgccatccagaattggggccatgtcaatcgctcaaaga
gtcgcggaggaaatggacgtaagcattgggcatgaagttggctataagactcgatttgaa
gcttctaccagtaacataacagctctaaagtttctcaccgatgatgtactttttagagag
gcgttgatggacccgcttttgacgaaatacagtgtgattgttctgggtgaggttcacaag
ttcagactttcaacggatgttctttgcactgttctgaagaaagctctggaggagcgacct
aagatgaagcttgttcttatgagtgctatcgatgaagaagcaacttttcaatgctacttc
cccagtgccatcatcatgaagttgcctggtcccatctatccagttactatccattacgct
ccaaaagaggttgggagttatgtaaaagctgctattgacatatctctccagatacatagc
aatgaacctgcaggagctattctgatatttctctgtgcacaagctgaagttgaatatgca
tgctggaaaattagacagaagctcaatgcctcgcgcgatcttgttggtgcagttgatatt
gtcccaatttactctacaatatccttagaaatgcagcagaggctttttcaacctcctcct
atcatatggaatgtggaagcgcctcctggtaggacgatctttgtgtctacaggaatcgct
gaggcttcattaacactagatggtatagtttatgtcatagattctgggttttcttatcag
aagatttgtgatggagatatgtgggcagaaaaacacattctagcaccaattccaaaggca
tgtgccagtcagagagcaggtcttgctggaagaaaacaacctgggaggtgctacaggttg
tacactgaggagtggtttcaggaactgtcgcagcaggtgtacccttaa
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