KEGG   Triticum aestivum (bread wheat): 123144382
Entry
123144382         CDS       T07757                                 
Name
(RefSeq) protein CLP1 homolog
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
taes  Triticum aestivum (bread wheat)
Pathway
taes03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:taes00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    123144382
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:taes03019]
    123144382
Enzymes [BR:taes01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     123144382
Messenger RNA biogenesis [BR:taes03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     123144382
SSDB
Motif
Pfam: CLP1_P Clp1 CLP1_N nSTAND3 ATP_bind_1 AAA_22 ABC_tran CbiA SRPRB AAA_10 AAA_29 MMR_HSR1 GTP_EFTU AAA_24
Other DBs
NCBI-GeneID: 123144382
NCBI-ProteinID: XP_044419434
LinkDB
Position
6D:179342727..179347613
AA seq 438 aa
MAATGAAAPAPAAVQPPRQFKLDPQSELRVEVLPDATLRVRLVSGTAEIFGTELPPEGWL
TIPPRSKIAIFTWHGATVELDGVSESEYTSDETPMVIYVNTHAILDARRARARAAQGGDL
EASQGPRVIVVGPTDSGKSTLCKMLLSWAAKLGWKPTYVDLDIGQGSITIPGCISATPIE
KPIDIVDGIPLEMPLAYFYGHPNPSINPDVYKALMRELAQTLETQFSGNAESRAAGMVIN
TMGWVEGLGYELLLNAIDIFKANVVLVLGQEKLWKMLKDAVQSKPNIDVVKLHKSEGVVL
RNSKYRQKTRSFRIKEYFYGIANDLAPHSNVVNFSDVSVFRIGSGHQAPRSALPIGAEPV
ADPTRLVAVNISTDMVHTVLAVSYAKEPDEIISSNVAGFIHVTDVDIQRKKLTYIAPCPG
DLPSRLLIASSLTWYEQA
NT seq 1317 nt   +upstreamnt  +downstreamnt
atggccgccaccggcgctgccgcgcccgcgcccgcggccgtgcagccgccgcggcagttc
aagctcgacccgcagagcgagctccgcgtggaggtgctcccggacgcgaccctccgcgtg
cgcctcgtctccggcacggcggagatcttcggcaccgagctcccgcccgagggctggctc
accatcccgccccgctccaagatcgccattttcacgtggcacggcgcgacggtggagctg
gacggggtcagcgagagcgagtacacgtccgacgagacgccgatggtgatttatgtcaac
acgcatgcgattctcgatgcacggagggcgagggcgagggcagcgcagggaggcgacttg
gaggcctcacagggacctagagtgattgttgtggggccaactgattctggaaaaagcact
ctgtgcaaaatgctccttagctgggctgccaaactgggatggaagcctacatatgtggat
ttagatattggccagggttccataaccatacctggatgtatttctgctacaccaatagag
aaacccatagatatagttgatgggattcctttggagatgccgcttgcatacttttatggc
catccaaatccaagtattaatccagatgtttacaaagcgctcatgagagagctagctcaa
acattagagacacagttctctgggaatgctgaatctagggcggccggtatggttattaac
acaatggggtgggttgaaggccttggctatgagttacttcttaatgcaattgacatcttc
aaggctaatgtagtgctggtattgggacaggagaagctctggaagatgttaaaagatgca
gtacaaagtaagcccaatatcgatgtcgtaaaacttcataaatctgagggtgttgtccta
aggaattcaaaatatcgtcaaaagactaggagctttcgtatcaaggagtacttttatggg
attgcaaacgatctggcaccacattcaaatgtagtcaactttagtgatgtttctgttttc
agaattggtagtggacatcaagctccacggtcagctttaccaattggtgcagagcctgtg
gcagatcccactcggcttgttgctgtcaacatcagcactgatatggtccacacagtgctt
gctgtttcttatgcgaaggaacctgatgaaataatttcgagcaacgttgccggattcatc
catgtcacagatgttgacatccaaaggaagaagctgacgtacatcgcgccttgcccagga
gacctgccaagcaggctgttaatcgcgagctccctgacatggtacgagcaggcttga

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