Triticum aestivum (bread wheat): 123144934
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Entry
123144934 CDS
T07757
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 8-like
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123144934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123144934
03036 Chromosome and associated proteins [BR:
taes03036
]
123144934
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123144934
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123144934
mRNA degradation factors
5'-3' decay
Decapping complex
123144934
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Gene silencing
piRNA pathway
123144934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
TFIIA
DUF2457
Motif
Other DBs
NCBI-GeneID:
123144934
NCBI-ProteinID:
XP_044420142
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All DBs
Position
6D:331203001..331211498
Genome browser
AA seq
523 aa
AA seq
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MDPRARYPPGTGNGRGGNPNYYGRGPPLSQNNHHHHQQTSGAHQQQYVQRQPQPQPQQHH
QNNHQQQHHQNNHQQQHHQNHHHHHQQQQQQWLRRNQINAAGTSGPKVVGPPPAAVGNDP
SSQDWKAQLKLPPADTRFRTEDVTATKGNEFEDYFLKRELLMGIYEKGFENPSPIQEESI
PIALTGSDILARAKNGTGKTAAFCIPALEKIDQDKNAIQVVIVVPTRELALQTSQVCKEL
GKHLKIQVMVTTGGTSLKDDIVRLYQPVHLLVGTPGRILDLTKKGVCILKDCSMLVMDEA
DKLLSPEFQPSIEQLIRYLPASRQILMFSATFPVTVKEFKDKYLPKPYVINLMDELTLKG
ITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKM
LQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKSSETYLHRVGRSGRF
GHLGLAVNLITYEDRFNLYRIEQELGTEIKPIPPQIDQAIYCQ
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggatccgcgcgccaggtaccctcccggaaccggcaacggtcgcggcgggaaccctaac
tactacgggcgtggcccgccgttgtcgcagaacaaccaccaccaccaccagcagacgtcg
ggggcgcaccagcaacaatacgtgcagcgccagccgcagccgcagccgcagcagcaccac
caaaataaccaccagcagcagcaccaccaaaataaccaccagcagcagcatcaccaaaat
caccaccaccaccaccagcagcagcagcagcagtggctgcggcgaaaccagatcaacgcg
gccgggaccagcgggcccaaggtcgtggggccacccccagcggcggtcggcaacgatcct
agttcacaagattggaaggcccaactgaagcttccacccgcagatacacgattcaggaca
gaggatgttactgccaccaaagggaatgagtttgaagactattttcttaagcgtgaactc
ctgatgggaatatatgagaaaggatttgaaaatccctccccaatccaagaagaaagcatt
cctattgcattaactggtagtgatattcttgctagagcaaaaaatggaactggcaagaca
gctgcattttgtattcctgcactggaaaagatcgaccaggacaaaaatgctattcaagtt
gttatagttgttcccacaagggaactggctctacagacatcccaagtttgcaaagagctt
ggcaagcacctgaagattcaagttatggtcaccactggtggaactagcctgaaggatgat
attgttcgtctatatcaacctgtccatttacttgttggaacgcctggacgtattttggac
cttacgaagaaaggtgtttgcatcttgaaggactgttcaatgcttgttatggacgaggca
gacaagcttctctctcctgaatttcaaccttctatagagcagttgatccgttaccttcca
gcgagtcgacagattttaatgttttcagcaacattccctgtgactgtcaaggagttcaag
gataaatatctgcctaaaccttatgttattaacctcatggatgaacttacactgaaggga
attacacaattctatgcttttgtagaagaaaggcagaaagttcattgtcttaacaccctc
ttttccaagcttcaaataaatcagtcaataatattctgcaactctgtaaatcgtgttgag
ctattagcgaaaaagatcacggagcttggttactcatgcttctacatccatgcaaagatg
ctgcaggaccaccgtaacagagttttccatgatttccgtaatggggcatgcaggaacctt
gtttgtacagatcttttcacaagggggatagatattcaagctgttaatgttgttatcaat
tttgatttccccaagagctctgaaacgtatctccacagggttggtagatctgggagattc
ggtcaccttggtttggctgtgaatttgatcacctacgaggatcgctttaacttgtatagg
attgagcaggagcttgggactgagataaaaccaattccccctcagatagaccaggccata
tattgccaatga
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