Triticum aestivum (bread wheat): 123145640
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Entry
123145640 CDS
T07757
Name
(RefSeq) nuclear exosome regulator NRDE2-like
KO
K26109
nuclear exosome regulator NRDE2
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123145640
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
123145640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
HAT_Syf1_CNRKL1_N
Suf
TPR_19
TPR_15
HAT_PRP39_C
Motif
Other DBs
NCBI-GeneID:
123145640
NCBI-ProteinID:
XP_044421040
UniProt:
A0A3B6QLR8
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All DBs
Position
6D:complement(434359588..434368820)
Genome browser
AA seq
1147 aa
AA seq
DB search
MEPSPERSPPTTTATAAGGGHEPSNSSSLFPLFPLSAPTEVSQCLPNPSFSFDASSLNIP
PTASSSLPPLSPSSDEEEAAPKPAPAKYNLLPSSPSDEERGSRRDDRKRRKRRRDQERYE
GGASSRKPGVRAWAGSETKLVKDYYVDAKGDQDNLAFGSIYRMDIARYKPQNTLETRGLN
RRFYNYGHASSQMDLDSDLDGLDNKVKVGGRYFSAKHAVLERNKGFKHLKVLKSDMIAIL
PEDFIPVETSSLAVKSTTVQQELEESWEDEILRRTKEFNKMTRECPHDEKIWLAFAQFQD
KVASSQPQKAARFQTTERKISILEKAVELNPDNEELLLCLLKSYGERDSSESLFGKWEKI
LMEHPDSCKLWKQYLLLCQGEFSRFKVSDTRKSYSYAVQALSAACTKLCRQDCENADLKA
HPSLVQVELGLVDIFVNLCRFEWQTGHRELATGLFQAQIEFSLFSPPLSLSTSSKQRLFE
HFWNSGGARIGEDGALGWSTWLAKDEESRQNMVMQENPQEPEGGGWSGWFNPSVANAETN
DVSNQSIEELAADGIDPEDPDTEDTPAQDDVESLLKKLGIDVETEYSSEVKDAKTWNRWS
TMELSRENEQWMPLRENSGVGPNHSNDASSGEVNDQLSRVILFEDVTEFLFSLSSEEARF
SLICQFIDFYGGKISRWTSSNSSSWLDRIMSLEMISNDISEDLIAISDLANKTQNSSHCS
LESLLGSMHDLSQRPGLVKFLKNAILLSLDIFPRNHILEEAVLVTTQMYTAQENTLSTPA
NASRALAKNLLKKDRQDLLLCGIYGRIEARHGNIDQARKIFDMALLSTEGATQDLVRKVP
ILYFWYAEMEISISTSRNNSDSAHRAIYILSCLGSNIKYSSFGGPISRPLVLRARQGFKE
QIRSLRSAFASGCLKEESVALICCASLFESMTSGYSSGLEVIEEACPFSESHTLEFEELW
MYYIKLLQKNLNQLSLSRVWPSILKGVQTYPYNPKSYASMLTLSCLYSVPNNLRLTLDKC
SQRDPSIVALLFALSFEWSKAGSYNRIHSLFERALADDKLQKSVLLWRCYLAYEAEIACN
TSAARRVFFRAIHACPWSKRLWLDGFQKLSSVLTMKELSDLQEVMHGKELFIRTDIYEIL
LQDEDDI
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggagccatcgccggagcgttcgccgccgaccaccaccgccaccgccgctggaggaggg
cacgagccctccaactcctcctctctcttccccctcttcccgctctctgcccccaccgag
gtttcccagtgtctcccgaaccctagcttctccttcgacgcctcctccctcaacatccca
cccactgcctcctcgtccctcccgccgctgagcccctcttcggacgaggaggaggcggcc
ccgaagcctgctcccgcgaagtacaacctgctgccgtcctcgccgtccgacgaggagagg
gggtcgaggcgggacgacaggaagaggaggaagcggaggagggaccaggagcggtatgag
gggggcgcctcttcgcggaagccgggggttcgtgcctgggctgggtcggagaccaagctg
gtcaaggattactacgtcgacgccaagggcgaccaggataacttggcatttggatcaatc
tacagaatggacattgcacgttacaagcctcaaaacacactggagacacgtgggcttaat
cgacgtttctataattatggacatgcttcatcgcagatggatctagattcagatttggat
ggactggataacaaagtaaaagtgggagggcgttacttttcagcaaaacatgccgtttta
gaaagaaacaagggtttcaagcacctgaaagttttgaaaagtgatatgattgcaattctc
cctgaagattttatccctgtagagacatcatcccttgctgtgaaaagcacaaccgtgcaa
caggagcttgaggaatcttgggaagatgaaatacttcggaggacaaaagaattcaataag
atgacacgagaatgtcctcatgatgaaaaaatctggttggccttcgctcagtttcaggac
aaagttgccagtagtcagccacaaaaagcagcacgttttcaaacaactgaaagaaaaatt
agtatattggagaaggctgtggagctcaatccagataacgaggaattgttgctttgcctt
ctgaagtcatatggtgagagggatagctctgagagtctctttggtaaatgggagaaaata
cttatggaacaccctgacagttgtaagttgtggaaacagtatctacttctgtgccaaggg
gaattctccagattcaaagtatctgatacacggaagtcttactcatatgcagtacaggct
ctatctgcagcttgcacaaagctatgtaggcaggattgtgaaaatgctgatctcaaagca
catccttccttagttcaggttgaacttggtttagtggatatatttgtgaatctttgccgg
tttgaatggcaaacaggacatcgagaattagcaactgggttatttcaagctcaaattgag
tttagcctattctcgcctcccctttccctgtccacaagcagtaagcaaagactctttgag
cacttctggaatagtggtggtgccagaattggagaagatggggctcttggatggtctaca
tggttagcaaaggatgaggagagtcgacaaaacatggttatgcaagaaaatcctcaagag
cctgaagggggaggctggagtggttggtttaatccatctgtagcaaatgctgaaacaaat
gatgtgtctaaccaatcaatagaagaattagctgctgatggaattgatccagaagaccct
gatactgaggacacacctgcacaagatgatgttgaatctttactaaaaaagctcggcatt
gatgtagagactgagtacagtagcgaagttaaggatgcaaaaacatggaatagatggtcc
acaatggagctgtcaagggagaatgaacaatggatgccccttcgtgaaaattctggagta
ggaccaaatcattctaatgatgcctcatctggagaagtcaatgatcagctttccagagta
atcttgtttgaggatgtaactgagtttctgttctctttatcgtcagaagaggctcgtttt
tccttgatatgccaatttattgatttctatggtggcaaaatttctagatggacatccagc
aacagttcaagttggcttgatagaattatgagccttgagatgatttcaaatgatatttcg
gaagatcttatcgctatatctgaccttgcaaacaagacacaaaattcaagtcattgtagt
ttggagtctttattaggaagtatgcatgatctttctcaaagacctggcctggtgaaattt
ctaaaaaatgcaatattgctttcccttgatatattccctcgtaatcatatcttggaggaa
gctgtccttgttaccacccaaatgtatacggcacaagagaacactttgtctactccagct
aatgcatcgcgggctttggccaaaaacctgctgaagaaagacagacaggatcttctgctt
tgtggtatatatggccgaattgaggctaggcatgggaacattgaccaagcaaggaagata
tttgacatggcactgttatctacagaaggagctacacaggatctcgtcaggaaggttcct
attctttatttttggtatgctgagatggaaatatcaatatctacttcaagaaacaattct
gactcggcacatcgtgcaatatacattctttcctgcttgggtagcaatatcaagtattct
tcttttggcggtcctatatcacgcccgctggtattaagggctcgtcaaggatttaaggag
cagattagaagcctgcggtctgcatttgcaagtggttgtttgaaagaagaatcagttgct
ctgatttgctgtgcttccttgttcgagagtatgacttctggttattcttctggtcttgaa
gtgatagaggaggcctgtccattttcagagagccataccttggaatttgaagagttgtgg
atgtattacatcaaactgcttcagaagaatctgaaccagttgagtctctcaagggtttgg
ccgagcatattgaaaggagtacaaacatatccatacaatccaaaatcatatgcatccatg
ttaactctgagctgtctttacagtgttcccaacaatctgcgtcttacacttgacaaatgc
agtcaaagggacccttccatagttgccttgctgttcgctttgtcctttgaatggagtaaa
gcaggatcttacaatagaatccacagtctgtttgagagagctctagctgatgataagtta
cagaagtctgttctgttgtggcgctgttatctagcttatgaggcagagatagcctgtaat
acttctgcggcacgacgtgtgttcttcagagctatacatgcttgcccatggtctaaacga
ttatggcttgatgggttccaaaaattgagctcagttctgactatgaaagagttatcagat
ctccaggaagttatgcatggcaaggaattgttcattcgcactgatatctatgagatactg
ttacaagatgaagatgacatatga
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