Triticum aestivum (bread wheat): 123145722
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Entry
123145722 CDS
T07757
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03030
DNA replication
taes03420
Nucleotide excision repair
taes03430
Mismatch repair
taes03440
Homologous recombination
taes03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123145722
03420 Nucleotide excision repair
123145722
03430 Mismatch repair
123145722
03440 Homologous recombination
123145722
03460 Fanconi anemia pathway
123145722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
taes03000
]
123145722
03032 DNA replication proteins [BR:
taes03032
]
123145722
03400 DNA repair and recombination proteins [BR:
taes03400
]
123145722
Transcription factors [BR:
taes03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
123145722
DNA replication proteins [BR:
taes03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
123145722
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
123145722
MMR (mismatch excision repair)
123145722
DSBR (double strand breaks repair)
HR (homologous recombination)
123145722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
CDC24_OB3
Motif
Other DBs
NCBI-GeneID:
123145722
NCBI-ProteinID:
XP_044421131
UniProt:
A0A3B6QM57
LinkDB
All DBs
Position
6D:complement(445246496..445250069)
Genome browser
AA seq
654 aa
AA seq
DB search
MASARLSPNGVGAALAGDTNLRPIVQVVNLRCVNVDGKGTPRSDRWRGLVSDGAETCPAM
FAGQLSDLARSGLIRRGSVVQLDEYVINMVGGRRVIVVLNLTVLLAECDIIGNPVITPES
ESSNQNNPRVEQFNGTRQYGLAAGNPSPTRPNGNVPVFQPSLAGNSLNTATRLSDKSPVF
QPTAQPSYRPAPSYKNQGAIAKNEAPARIIPISSLNPYQGRWAIKGRVTAKGDIRRYHNA
KGEGKVFNFDLLDSDGGEIRVACFNTQLDRFYEVVEVGKVYVVSRGNLKPVQRNYNHLNS
EWEITLERDSSVDLCPDENSSIPSQQYNFRPISEIEDTPTGTILDIIGVAISVSPSTTVQ
KKNGTETLKRIIGLKDMSGRSVDLTMWGDFCNREGSQLQEMVERGVFPVLGVKTGRVNDF
NGKCVGTISSSQLLIDPDLSEAHTLRQWFDGGGRDASTQSISRDHTPAASRNEVRTTVAK
IKDDGLGMGDKPDWVTVKASIIFFKSDNFCYTACPTKEGDRQCNKKVTKGTSGLWVCDKC
DKEFPECDYRYLLQLQIQDHSGTTWVTAFQETAQELLGCSALELITYKENGDPRFAETML
SCLFKDYLLRLKVKEETYSDERRVKNTLVKVERFDPAAESRYLLDLLSRSVASY
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcgaggctgagcccgaacggcgtgggggcggcgctggcgggggacacgaac
ctccggcccatcgtgcaggtcgtcaacctgcgctgcgtcaacgtcgacggcaagggcacg
ccccggagcgaccggtggcgcggcctcgtctccgacggcgccgagacctgccccgcgatg
ttcgccggccagctcagcgacctcgcgcgctccggcctcatccgccgcggctccgtcgtg
cagctcgacgagtacgtcatcaacatggtcggcggcagaagggttatcgtcgttctgaat
ttgacagttcttcttgcggagtgtgacatcattggcaatccagtgattactccagaaagt
gaatcttctaatcaaaacaacccaagagtggagcaatttaacggaacacgtcaatatggt
ttggcggcaggaaacccaagtcccacaaggcccaatggcaatgttccagtcttccaacct
tcgctggcagggaactccttgaacacagccaccaggctcagtgacaaatctccagtcttc
cagccaacagcacagccatcttatcgtcctgcacccagttacaaaaatcaaggagcaatt
gcgaaaaatgaagcccctgctagaataatccccatatcttctttaaatccttatcagggc
cgctgggctatcaagggtagagttactgcaaagggagacatccgccggtaccacaatgca
aaaggtgaaggcaaagtgttcaactttgacctgcttgattctgatgggggtgagatacgg
gtggcatgtttcaacactcaacttgatcgcttctatgaagttgtggaagttggtaaggtc
tatgtggtatcaagaggaaacttgaaacctgtacagaggaactataaccatctgaacagc
gagtgggagattacgttggagagagattcatcagtggatctttgtcctgatgagaacagc
tcaattccttctcagcagtataacttcagaccgatcagtgaaattgaggatactccgacc
ggtactatacttgatatcataggtgttgctatctctgtcagcccttccaccacagtacag
aagaaaaatggcacggaaactctgaaaagaattattggcctgaaggatatgtctggtcga
agtgttgatctaaccatgtggggtgacttttgcaacagagaaggctcacagctgcaagaa
atggttgaacgtggggtcttccctgtgctgggtgtcaaaacaggaagagtgaatgatttc
aatggcaagtgtgtcggcacaatttcttcctctcaactcctcatagaccctgatctctct
gaagctcatactctgaggcaatggttcgacggtggaggaagggatgcttctactcagtcc
atatccagggatcacactcctgcagcatcaaggaacgaggtccgaacgacagttgctaaa
atcaaggatgatggtcttggaatgggagacaaacctgattgggttacggtgaaagcctcc
attatattcttcaagagcgacaacttctgctacacagcttgccctaccaaggaaggtgac
cggcagtgcaataagaaagtgacaaaggggacctctggcttgtgggtgtgtgacaaatgc
gacaaggagtttccagagtgtgactacaggtatcttctgcagcttcagattcaagatcac
tcgggaacaacttgggtgacagcgtttcaggagaccgcgcaagagttactaggctgctcg
gcgctagaactcattacatacaaagagaacggagaccctcgttttgcagagaccatgctc
agctgtttgttcaaggattatctgctcaggctgaaagtcaaagaagaaacgtacagcgac
gagcggagagtgaagaacacattggtcaaagtggagaggtttgatcctgctgccgaaagt
agatatctgctcgatttactttcaaggtcggtggcatcatattga
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