Triticum aestivum (bread wheat): 123146354
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Entry
123146354 CDS
T07757
Name
(RefSeq) eukaryotic initiation factor 4A-III homolog B-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03013
Nucleocytoplasmic transport
taes03015
mRNA surveillance pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123146354
09122 Translation
03013 Nucleocytoplasmic transport
123146354
03015 mRNA surveillance pathway
123146354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123146354
03041 Spliceosome [BR:
taes03041
]
123146354
03009 Ribosome biogenesis [BR:
taes03009
]
123146354
03012 Translation factors [BR:
taes03012
]
123146354
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123146354
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123146354
mRNA cycle factors
Stress granule specific factors
123146354
Spliceosome [BR:
taes03041
]
Complex C
Other components
EJC/TREX
123146354
Ribosome biogenesis [BR:
taes03009
]
Eukaryotic type
90S particles
Helicases
123146354
Translation factors [BR:
taes03012
]
Eukaryotic type
Initiation factors
eIF-4
123146354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
Cas3-like_C_2
AAA
Helicase_RecD
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
123146354
NCBI-ProteinID:
XP_044421941
UniProt:
A0A3B6QPU4
LinkDB
All DBs
Position
6D:492251902..492256568
Genome browser
AA seq
413 aa
AA seq
DB search
MAAAAGGATTSTRRGPGGGGRPMDDENLTFETSAGVEVVGSFDAMGIREDLLRGIYGYGF
EKPSAIQQRAVIPIITGRDVIAQAQSGTGKTSMISLSVCQVIETNVHEVQALILSPTREL
ATQTERVMQAVGNFMSVSVHACVGGKSIGEDIRKLESGVHVVSGTPGRVCDMIKRRTLRT
RAIKLLVLDEADEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHDILEITSKFMTDPVR
ILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMR
TNNFTVSAMHGDMPQKERDAIMSEFRGGTTRVLITTDVWARGLDVQQVSLVINYDLPNNR
ELYIHRIGRSGRFGRKGVAINFVRKDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcgggcggcgcgacgacctcgacgaggcgcgggccgggcggcgggggc
cggccgatggacgacgagaacctgaccttcgagacctccgcgggggtggaggtcgtgggc
agcttcgacgccatggggatccgcgaggacctcctccgcggcatctacggctacggcttc
gagaagccctccgccatccagcagcgcgccgtcatccccatcatcaccggccgcgacgtc
atcgcgcaggcccagtccggcaccggcaagacctccatgatctccctctccgtctgccag
gtcatcgagaccaacgtccacgaggtgcaggcgctgatactgtcgccaactagggaactg
gcgacgcaaacagagagggtgatgcaggctgttggtaactttatgagcgtctctgtgcac
gcctgtgttggtggcaaaagtatcggcgaggacattaggaagctcgagtctggagtgcat
gttgtttcaggaaccccgggcagagtatgtgatatgatcaagagaaggaccttgcgcaca
agggccatcaagctcctagtcctggacgaagccgatgagatgttgagcagaggtttcaag
gatcagatatatgatgtctacagatatcttcccccagaacttcaggttgttttgatctct
gcaactttgccccatgacatcttggagataactagcaagttcatgactgatccagtcagg
atccttgtaaaacgtgatgagttgaccctagagggcatcaaacaattctttgttgctgtt
gagaaagaggaatggaagtttgatacactgtgcgatctttatgatacacttaccatcacc
caagctgtcattttctgtaacactaagagaaaggtggattggcttactgaaaggatgcgc
accaacaacttcacggtgtcagctatgcacggtgacatgcctcagaaggaaagggatgcg
atcatgagtgagttcaggggtggcacgacccgtgttctgatcacaaccgatgtttgggct
cgagggctggatgtccagcaggtctctcttgtcattaattacgatctccccaacaaccgt
gagctttacatccatcgtattggtcgctctgggcgtttcgggcgcaagggtgtggcgatc
aactttgtgcgcaaggatgacatccgtatccttcgggacatcgagcagtactacagcacg
cagatcgacgagatgcccatgaacgtcgccgatcttatctga
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