Triticum aestivum (bread wheat): 123148890
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Entry
123148890 CDS
T07757
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
123148890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
taes04131
]
123148890
Membrane trafficking [BR:
taes04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
123148890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
Beta-prop_EML_2
Beta-prop_EML
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
VPS8_N
TPR_VPS8_2
Beta-prop_HPS5
ANAPC4_WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40
Beta-prop_IFT140_1st
TPR_Vps41
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
123148890
NCBI-ProteinID:
XP_044424345
LinkDB
All DBs
Position
7A:complement(642706308..642718634)
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AA seq
1948 aa
AA seq
DB search
MASQPPPPPHELDLEAFPPSSPPPASDADHRRAVDDLLLLLSSSDSDGDDETNPTPSTNY
KTRIKAPSPPPNELDLEAFPPLSQASSSVSDADADRRRAVDDLLLLLSSSDCDEDDEPNL
APSTKHKPLTRIKTTPPPPKPSPSPLPLPSASPGRSTSASPSATLSYLAPRTFSNNAASS
SRPLPSLFRGVRPSPKPGAALAAAAVASRAILTPHAAAIKSRRTASAPIEKLLDQGSEGF
LSTRNFKGDEVAEKVSEEVVARVTDETIGGNGVEELEENSKPSESVENVNEHEQLEGENL
AETDQPGSQIRFIVEENGDEPISKGIFVESGDIQDGSLSHQKTDDGLEIERSETDLEEQM
KSERIIDKVIEETLEISRMAEKNAEKKPKVPIKPLEWAEELEKRQASFGQHWEEGAAAQP
MRLQGIGKGQPAIGYMQIEVDNPITRAMASPSFRQEHGSPQILAVHRSYIAMGMSNGSVI
IVPSKYSIHQADDTNAKMLFFWNQGEKTQSPVTAMCFNPQGDLLLVGYGDGHMTIWDVQK
ATAAKVIYGEHTGAVVHVCFIHQSKAITGDSKGLVLMHTFSIIPVINRLTVKGIQRLFDG
HTGIVLSACPLLANESFGSGNQTTSSSGGHGSMMGGVVGVDSRWKFFNEGSSPMEDGVTV
MFIMHQHALVVRLHTNTDHVEHIETFSRPEGSREGSIAYAAWKYTSSSSDSSPIDEEQVS
WLALAWDRQVQVVKFVKSKMIKHKDWKLDSVAVGVAWLKDKMLAVLNLRGQLCLFSKDGS
ELRRTIFILDGLLFDDSILYHTHFSNRFGNPERHFNNSVAVRGATVYILGPSFLTVSRLL
PWKERIEALKRAGNWMGAMDMAMKLYDGHTQGVVDLPRKVDSIREAIVPSLLELLLSYIG
YVFEYISIALSNHTGKGGAADGLIDADRSLLTEREEQYARVAGAAVEFCVHIGRNDILFD
TVFSKFVAAQSGGVFLEALEPYILKDMLGSLPPEIMQALVEHYSGKGWLQRVEQCILHMD
ISSLDFNQVVRLCREHGLYGALIYLFNQGLNDFRTPLEELLSVIQNATRKDATCYRMLVY
LKYCFQGLTFPPGHGMIPRAQLHSLRRELVQFMLEESKMLTSEVFKGFSSSSGKCPNICY
LLWMDTEATLEVVKCAFAHENFQPTCTPDASVSKDEDDTNIERTDSQNVLLQSVVDTIIH
IIGLENEAIHSVVVGTADSEESELWPSVKDFGCIIEFVSFSISSKGVKPSQRVLKHILKY
FTSSNTPSYDDKNVLAQKEVLQLFNVVPQADWNSDYVLHLCLDAHFHQACGRIYTARNQN
LSALDSYMKDIVEPYHAFIFINKKLFQLAGNEALSFRSTVIFRFVELVNLSRECAFVLFL
DHFQNEIQQILSEFHSDNGSHFLFLKTAMEVHLSGKLDFSALTARNYEIVARQYFSGETE
DYLQRLSNFSKLFDRNLVSIIDELFEPYLKLLCQYEPRSVLKFLETFDSNRLDGCLQPCL
DYGVTDAAAFLQERRGYVQSALALVLAGLDEKISQFITSVENAFSHISSKSISEIEQPAI
VLKMSEAHPVLDTLRSSIGLCQRNSQRSDPGKSQSLWFQLLDSFSEALKKLYGSKDVNGK
GCPSKGDETTNGHPTGKGFSQQMAISAYQRCLNTLRRVFSQFIGEIIEAMAGYIPLPTIM
SKLLSDNGSQEFGDFKLVIHRMLSMHLYEKRILETTKSVIEDDSFYTLSLLKRGVCHGFA
PHTFVCCVCSCSVSKGVISAVRVFSCGHATHLHCEAEQSKSSSRDFKDGCSVCLLVSDTQ
TGKKSPIISENGQPKYPMVENEVAYAVYHNNETNHVERSRGLQQMSLFEILRSLQKAEKS
LHIEIVPPLKLSPPAIYQEKIQKRVSLAGESSRHSIGSEKTQKILHLKEAKSNKRISWVG
ESIRHLARSEKTTENRKLASAEVKHIRF
NT seq
5847 nt
NT seq
+upstream
nt +downstream
nt
atggcatcccagccaccgcctccgccccatgagctcgacctagaggccttccccccgtct
tctcctcctcccgcctccgacgccgatcaccgccgcgccgttgacgacctgctcctcctc
ctctcttcgtccgactccgacggcgacgacgagacaaaccctacacccagcaccaactac
aaaacccgtatcaaagccccatcgccgccccctaatgagctcgatctggaggccttcccc
ccgttgtctcaagcctcctcctcagtctccgacgccgacgccgatcgccgccgcgctgtc
gacgacctgctcctcctcctctcctcgtccgactgcgacgaagacgacgagccaaacctt
gcacccagcaccaaacacaaacctctgacccgtatcaaaaccacaccgccgcctcctaaa
ccttctccatctcctctgccgttgccttccgcgtcccccgggagatccacatccgcatcg
ccgtcggcgacgctctcctaccttgccccgagaaccttttcaaacaacgctgcctcctcg
tcgaggccactcccctcgctcttccggggtgtccgccccagccccaaaccaggcgccgcc
ctcgctgcggccgcggtggcgtcccgcgctattctcactccgcacgccgctgcaattaag
tcgcggcgcactgcctccgcgcccatcgagaagctcctcgaccaaggctccgagggtttc
ctttctacccgaaatttcaaaggagacgaagtagctgagaaggtcagtgaggaagtggtt
gctagggtgacggacgaaactatcggcgggaatggtgttgaagagttggaagagaattcc
aagccctcagaatcggtggaaaatgtcaatgagcatgagcaacttgagggcgagaatttg
gctgaaaccgatcaacctgggagtcaaattcggtttattgttgaggaaaatggtgatgag
ccaattagcaaaggaatttttgtggaatctggtgacattcaggatgggtcactttcccat
caaaagactgatgacgggctggaaattgaacgttctgaaactgatttggaagagcaaatg
aaatctgagaggatcatcgataaggttatcgaagagacgctggagatcagcaggatggct
gagaaaaatgcggagaaaaagccaaaggtcccgataaaaccattggagtgggctgaggag
ctcgagaagaggcaggcctcatttgggcagcactgggaggagggagcagcagcgcaacca
atgcgcctgcaggggattgggaagggccaaccagcaattggttacatgcagattgaggtg
gacaacccaataactcgtgccatggcctctccgtcttttagacaggaacatggctctcct
cagatcttagcagtacataggagctatattgccatgggcatgtccaatggatctgttatc
atcgtcccaagcaaatactccatccatcaagctgatgatacaaatgcaaagatgctgttc
ttttggaaccaaggtgaaaaaactcaatcaccagtgactgccatgtgcttcaacccgcaa
ggggatcttctgttagtaggatatggtgatggtcatatgacaatttgggatgtacagaag
gctactgcagcaaaagtcatatatggcgagcacacaggagctgtagtgcatgtttgtttt
atccaccaatctaaagccatcactggtgattcaaaagggcttgttcttatgcacacattc
tcgattatccccgtcattaatcgcttgactgtcaagggaatccagcgcctttttgatgga
catactggaatcgtgctctcggcctgtcctcttctagcgaatgagtcctttggttctggc
aaccaaacaacttcctccagtggtggtcatgggagcatgatgggaggtgtagttggagta
gattccagatggaagtttttcaatgaaggttcttctccaatggaggacggtgttacagtc
atgttcattatgcatcaacatgctcttgtggttagactccataccaatactgaccatgtt
gaacatattgagaccttctctagaccagaaggatcacgagaagggtcaattgcttatgct
gcatggaaatacacatcatcctcgagtgattcatcgccaattgatgaagagcaggtatct
tggcttgcgcttgcatgggaccgtcaagtacaagtggtaaaatttgttaaatcaaagatg
atcaaacataaggactggaagcttgatagtgtcgctgttggtgttgcctggttaaaggat
aagatgttagctgtccttaacttgagagggcagctctgtttgttctcaaaggatggcagt
gagcttcgcaggactatctttattcttgatggtttgctcttcgatgacagcatactgtac
catacacatttttctaacaggttcggtaaccctgagaggcattttaacaactcggtcgca
gtaagaggtgctacagtctatattcttggcccaagctttcttacagtttcgcgacttctt
ccatggaaagagcggattgaagcactaaagagggctggtaattggatgggtgcaatggac
atggcaatgaagctttatgacggtcacacacagggtgttgttgatcttccgagaaaagtt
gattctataagggaagccatagtgccgtctctattagagttgcttttgtcatatataggt
tatgtcttcgaatatatttcaattgcattgtcaaaccatactggaaaagggggggcagca
gatggcctgatagacgccgatagatccctgctgacagagagagaagagcaatatgcccgt
gtagcaggggctgcagtggagttttgtgttcacattggacggaatgacatcctgtttgac
acagtcttttctaagtttgttgctgctcaaagtggaggtgtgtttctggaggcactagag
ccatatatattgaaagatatgcttggttctttaccccctgagatcatgcaagctctagta
gagcattatagtggcaaaggatggttgcagcgagtcgaacaatgcattcttcatatggat
atttcatcactggattttaatcaggtagtcagactttgtcgtgagcatgggttatatggt
gccctaatatatttatttaaccaaggcctgaatgatttccgtacacctctagaggaactt
ctatctgttatccagaacgctactaggaaagatgctacttgctacagaatgcttgtttat
ctgaagtattgcttccagggcctaacatttcctccagggcatggaatgattccccgagcc
caacttcattcattgagaagagaacttgtgcaattcatgcttgaggagtctaaaatgctc
acttctgaagtatttaagggtttcagttcttcttctggaaaatgcccaaacatatgctat
ctactatggatggatacggaagctactctggaagttgtcaagtgtgcttttgcacatgag
aattttcaacctacttgtactcctgatgcatctgtgtccaaggatgaagatgatactaat
attgaaagaacagatagtcaaaatgtcttgttacaaagtgtagttgacaccatcattcat
attattggtttggaaaatgaggcaatccattccgttgttgtgggtactgctgactcagaa
gaatcagaactttggccttcagtgaaggattttggttgtataattgaatttgtgtccttt
tctatttccagtaaaggggtaaagccatctcaacgagttcttaaacacattcttaaatac
ttcacgtcatccaacactccatcatatgatgataaaaatgtgctagctcagaaagaagtt
cttcagctcttcaatgtggttcctcaagctgactggaattctgattatgtgttgcatctt
tgtttagatgcccattttcatcaggcatgtggcaggatatatacagccagaaatcaaaat
ttgtctgctttagatagttacatgaaggatatagtggaaccataccatgcttttatcttc
atcaacaaaaagttatttcagttggcaggcaatgaagctttatcgtttcgttccacagta
atatttcgttttgtcgagttggtcaatctaagcagggagtgcgcatttgtcttgttcctt
gatcattttcaaaatgagatccagcaaatattgtcagagtttcattctgataacggcagc
cactttcttttcttgaaaactgcaatggaagtacacttgtcaggaaaacttgacttcagt
gcactaactgcccggaactatgaaattgttgcacgtcagtacttctctggtgaaaccgaa
gattatctgcagagattatcaaatttctcaaagttgtttgatcgcaatcttgtttctatt
attgatgagttatttgaaccctatctgaagcttctatgtcagtatgaaccaaggtcagtc
ctgaagtttctggagacttttgatagcaacagattggacgggtgtttgcagccctgtcta
gattatggagttacagatgctgctgcatttctgcaagagaggcgtggttatgttcagagt
gcgcttgcacttgttctagctggactagatgagaaaattagccagtttatcacttcagtg
gaaaatgcgttttctcatatatcctcaaagagtatctctgaaattgagcaaccagccatt
gttctaaaaatgagtgaggctcatccggtgcttgatacattacgttcctctattggattg
tgccaaaggaactcacagcgctcagacccagggaagtctcaatcactttggtttcaactg
cttgactctttctcagaagcactgaaaaaattgtatggaagcaaggatgtaaatggaaaa
ggttgtccgtccaagggggatgaaacaacaaacggacatccaacaggcaaaggattctca
caacaaatggcgatttcagcttatcaaaggtgtttgaatactctgcggagagtattctca
caattcattggagagataatcgaggcaatggctgggtatatacccctacccacaattatg
tcaaagctgttatctgacaatgggagtcaagagtttggtgattttaagcttgtcatacat
agaatgctgtctatgcatctttatgaaaaaagaatactggaaacaactaagtcagttatt
gaggatgattcgttctataccttgagcttattaaagagaggggtttgccatggatttgct
ccacacacttttgtttgttgtgtatgtagttgctcagtttctaaaggtgttatttcagca
gttcgagtattcagttgtgggcatgcaacacatcttcattgtgaagctgaacagagcaaa
tcatcaagcagggattttaaagatggatgttcagtttgtctcttggtgagtgacacacaa
accgggaagaaatcacctataatatctgagaatgggcaacccaagtatcccatggttgaa
aatgaagtagcatatgccgtctatcataataacgagacaaatcatgttgagagatctcgt
gggcttcagcagatgtcactgtttgaaatactaagaagtctccagaaagctgagaagtct
cttcatattgaaattgtacctccgttgaaactttctccaccagctatatatcaggagaag
atacagaagcgagtaagtttggcgggagaatccagcagacactcaattggaagtgaaaaa
acacagaaaatattgcacttgaaagaggcaaaatcaaataagagaataagttgggtggga
gaatccatcagacatttagctagaagtgaaaaaaccacagaaaataggaaattggcttcc
gccgaagtcaagcatattcggttctga
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integrated database retrieval system
