Triticum aestivum (bread wheat): 123149263
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Entry
123149263 CDS
T07757
Name
(RefSeq) RNA polymerase sigma factor sigC-like
KO
K03093
RNA polymerase sigma-I factor
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123149263
Transcription machinery [BR:
taes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
123149263
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
123149263
NCBI-ProteinID:
XP_044424831
LinkDB
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Position
1B:685619836..685622771
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AA seq
569 aa
AA seq
DB search
MGLPMARGPCCCSPSPSSSSSSSSSSPWMLQAHLPKHPHSPLGGRSVCSESLRVLALHLL
LNRRANLSRRRGEIVGTAVSSPGLLQITENKASSSPIIKVDAERTSLDGALDRNAQFNMS
AWMDVSHTSSNSLEYNLLMQNIHVLQSSLAAQDLVVLERDILVHIEQLGALKWFNASRSG
ATITHTSHETDFALPWNDTKFTPITPLEEQSDDQLVIIRSGKSQERKLKRIRASEKIPGV
CVKASSRKPRKSRRSTSSQFITEWKNYPGRRRSIVREQSELLVTIKECANLEKIRENMVK
EGQEVCYDKWAKAAGVDEAALKSRLQAGYCCRERLLVTTEWLVKYIARTYTGMGTAFEDL
LQAGKMGVLDGAERFDSRRGCKFSTYVKYWIRKPMLALLAENSGVIQLPARMDCIIRKVR
EAKRAIRSSTGRNPIDAEIATFVGASVANVRLARKCSRRVVSLYMEVGAGQNAKFVDVTP
DTSLEDPEEAIFRRQLRERLLLVLDRLPAREGRVLKLRHGLEDGRCRSLEQIGGIYHVSK
EWIRKIEKSAMLKLRNEDVHDELKDFCGF
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgcccatggcgcgcggcccgtgctgctgctcgccctcgccgtcgtcgtcgtcg
tcctcctcctcctcctctccgtggatgctgcaggcccatctccccaagcacccccactct
ccactgggcgggaggtcagtttgctctgaatccctgagagttcttgccctgcatctcttg
ctcaatcggcgcgctaatcttagccggcgccggggtgagattgtcggaactgctgtgtct
tcacccggtttgcttcagataacagagaacaaggcaagcagctcaccaataataaaggtg
gatgcagaaagaacatcccttgatggtgctcttgacagaaatgcgcagttcaacatgtct
gcttggatggatgtatcgcacacaagtagcaacagtttggagtataacttattgatgcaa
aacatccacgtgttacagagtagtttggctgctcaagatttggtggtgcttgaaagagat
atccttgtacatattgaacagcttggagctctgaaatggtttaacgcgtcgaggtctggt
gccaccataacacatacctcacatgaaacagattttgcacttccttggaatgataccaaa
ttcactccgataactcctctcgaggagcaaagcgatgatcaattggtgattattcgaagc
gggaaaagccaagagaggaaactgaagagaattagagcgtcagaaaagatccccggggtt
tgtgtaaaagcatcctcacgaaaaccaagaaaatcacgcaggtccactagtagtcaattt
ataactgagtggaaaaactatccaggccggcgaaggagcatagttcgggaacagtcggag
ttgctggtgactatcaaggaatgtgcaaaccttgagaagatcagggaaaacatggtgaag
gaagggcaggaggtctgctatgataagtgggccaaagcagctggagttgatgaagcggcc
ctgaagagtagactgcaagccggatactgctgcagagagaggttactggtgaccaccgag
tggcttgtcaaatacattgcaaggacatacaccggaatggggacagctttcgaggatcta
ctccaggctgggaaaatgggtgtccttgatggcgctgagaggttcgacagccggagagga
tgcaaattctcaacctatgtgaagtactggataaggaaacccatgctagcgctcctcgct
gaaaattctggagtgatccagctgcccgcaaggatggattgtatcatccgaaaggtcagg
gaagctaagcgggcaattcgatccagcactgggcggaatccaatagacgcggagatcgcg
accttcgttggcgcgtcggttgccaatgttagattggctcggaagtgctcccgtcgtgtc
gtttcactctacatggaggtcggggccggacagaacgccaagttcgtggacgtgacccca
gacacatcactagaagacccagaggaggccatcttccggaggcagctgagggagaggctt
ctcctggtcctggacaggctcccggcgagggaagggcgcgtgctgaagctgcgacacggc
ctcgaggatggcaggtgccggtccctggagcagatcggaggcatctaccacgtgtccaag
gaatggatcaggaagatcgaaaagtcagctatgttgaagctcaggaacgaggacgtgcat
gatgagctgaaggacttctgtggattctag
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integrated database retrieval system
