Triticum aestivum (bread wheat): 123149730
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Entry
123149730 CDS
T07757
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123149730
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
taes01009
]
123149730
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123149730
Protein phosphatases and associated proteins [BR:
taes01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123149730
Spliceosome [BR:
taes03041
]
Common components
Common spliceosomal components
SR proteins
123149730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
123149730
NCBI-ProteinID:
XP_044425375
LinkDB
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Position
7A:725736068..725740477
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AA seq
424 aa
AA seq
DB search
MTAPAKRLGREAPVLARAQPRHPRPLRRHRLLLPPPPPRGLLFSSPLPVLPLLLLPVFFG
SEANGLMMLGLPSPAPVGPGPRASGPNRNRAPPRPDPRLHKPNRTSETHSGNPTASHARR
AAETLAPPRPFLPRAPRRLRRPVRRAMADSPRRRYTRPSRSPSPYKGRQKQMSRSRSPVA
QSQSRSPSPDPRAQARSRSRSPAREREPEAVNHGNTLYITGLSSRVTDKELREYFNKEGK
VVSCHVVLEPHTRVSRGFAFITMDTVEDAERCIKYLNQSELQGRNITVEKSRRGRPRTPT
PGSYLGHRYERREMQCGGRFRRGGYGRDDYYGNSYRRSPPPMYREYRDTRDYPPYRDTRD
YSPPHRDARDYYDGRGGRGYSPHRSPPPYGGRARRERSRSLPYSPYRMPERGYGRRAGGG
GYDR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgccggcgaagcgccttgggcgggaggcgcccgtcctcgcgcgcgcgcagccc
cgccacccgcgtcccctccgccggcatcgcctcctcctccctcctccgccgccgcgaggg
ctcctcttctcctcccctctgccggtgctgccactgctgctgcttcctgttttttttggg
agcgaagctaatggcctgatgatgctgggcctgccgagccccgcgcctgttgggcctggg
ccgcgcgcgtcggggcccaaccggaaccgggctcctccccggcccgacccccgcctacac
aaaccaaatcgaaccagcgaaacccattccggcaacccaaccgcatcgcacgcccgacgc
gcagccgaaaccctagccccgccccgccccttcctcccccgcgcaccccgccgtctccgc
cgtcccgttcgccgcgccatggccgattccccgcgccggaggtacacaaggccctcaagg
tccccttctccttataagggacgccaaaagcaaatgtcaaggtcaagatcacctgtagct
caatcccagtctagatctccatcgcctgatcctagagctcaggcgaggtcaagatctcga
agccctgcgagggagcgggagcctgaagctgtaaatcatggaaatactctgtacattact
ggactttcttctagggtgactgataaagaacttagagagtacttcaataaggaaggaaag
gtggtttcttgtcatgttgttcttgaaccccacacacgtgtttctcgtggatttgctttc
atcaccatggacactgttgaagatgctgaacgctgcatcaagtatctcaaccagtcagaa
ctgcaaggccggaacatcacagttgaaaagtcacgcagaggccgcccaaggacgcctact
cctgggagctatctgggccatcgctatgagcgcagagagatgcagtgtggaggtagattc
cgcagaggaggctacggtcgtgacgactactatggaaacagctaccgcaggtctccgcct
cccatgtaccgagaatacagggacacccgggactaccctccctacagggacacccgtgac
tactccccgccccacagggatgcccgagactactatgacggcaggggtggccggggctac
tccccccacaggtctccccctccttacggtggcagggcaagaagggagcggtctaggtcg
ctgccgtattccccgtaccgtatgcccgaaaggggttatggccgccgtgctggtggcggt
ggctacgacaggtga
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