Triticum aestivum (bread wheat): 123149969
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Entry
123149969 CDS
T07757
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 15-like
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03013
Nucleocytoplasmic transport
taes03015
mRNA surveillance pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123149969
09122 Translation
03013 Nucleocytoplasmic transport
123149969
03015 mRNA surveillance pathway
123149969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123149969
03041 Spliceosome [BR:
taes03041
]
123149969
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123149969
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123149969
Spliceosome [BR:
taes03041
]
Complex C
Other components
EJC/TREX
123149969
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123149969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Cas9_PI
DNA_repr_REX1B
Motif
Other DBs
NCBI-GeneID:
123149969
NCBI-ProteinID:
XP_044425700
LinkDB
All DBs
Position
1B:695602382..695606869
Genome browser
AA seq
431 aa
AA seq
DB search
MMGEAKENDVYEEELLDYEEDDDKALDASSAKPAADAAQAKKGYVGIHSSGFRDFLLKPE
LLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPTAGQVA
ALVLCHTRELAYQICNEFERFSKFLPELKVAVFYGGVHIKKHQDLLKNDCPHIVVGTPGR
ILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEI
RPICKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLTESEKNRKLNDLLDALDFNQVVIFVK
SVSRAAELNKLLCECNFPSICIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIER
VNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELP
EQIDTSTYMPS
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgatgggagaggccaaggagaacgacgtgtacgaggaggagctgctcgactacgaggag
gacgacgacaaggccctcgacgcctcctccgccaagcccgccgccgacgccgcccaggcc
aagaagggctacgtcggcatccacagctccggattccgcgacttcctcctcaagcccgag
ctgctccgggccatccaggactgcggattcgagcacccctccgaagtgcaacatgagtgc
atccctcaagcaatcctcggaatggatgtcatctgccaagcaaaatctgggatggggaag
actgctgtctttgtcctgtcgtctctccagcagatcgatcctactgctggtcaggtggca
gcgctcgtattgtgccacaccagagagctggcttaccagatttgcaacgagttcgagagg
ttcagcaaatttctgcctgaattaaaggttgctgtattctatggaggtgttcacatcaag
aaacatcaggatttgctcaagaacgactgcccccacattgttgtgggcacacctgggagg
attctagctctagctagagacaaggacctctctttgaagaatgtgaggcatttcattctt
gacgagtgtgacaagatgcttgagtcactggacatgcggagggatgtccaggagattttc
aagatgacacctcatgataagcaggtcatgatgttttcggcaactctcagcaaggagatc
cgtcccatttgcaagaaatttatgcaagatcctatggaaatttatgttgatgatgaggca
aagttgacccttcacggtcttgttcagcactacataaaattgacagagtcagagaagaac
cgaaaattgaacgatctcttggatgctctcgatttcaaccaagttgtgatatttgtgaag
agcgttagcagggctgcagagctgaacaagttgctttgtgaatgcaacttcccttcaatc
tgcatccattctggcatgacccaggaagagaggctgacccgatacaagaacttcaaggaa
gggcacaagaggattcttgtggcgacggatttggttggcagagggatcgacattgagcgt
gtcaacattgtgataaactatgacatgcctgattcagctgatacctacttgcacagggtt
ggaagggctgggcgttttggcaccaagggactcgccataacttttgtttcgtcggcctcg
gactcggacgtccttaaccaggtgcaagaacggtttgaggtggacatcaaggagctgcct
gagcagattgacacttcaacatacatgccgtcgtag
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