Triticum aestivum (bread wheat): 123154688
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Entry
123154688 CDS
T07757
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K13126
polyadenylate-binding protein
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03015
mRNA surveillance pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123154688
09123 Folding, sorting and degradation
03018 RNA degradation
123154688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123154688
03041 Spliceosome [BR:
taes03041
]
123154688
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123154688
mRNA cycle factors
Stress granule specific factors
123154688
Spliceosome [BR:
taes03041
]
Complex C
Other components
Complex C specific factors
123154688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_10
RRM_occluded
RBD_DEAH11
RRM_Nup35
RRM_7
RRM_3
SET_assoc
YflT
BRAP2
NSRP1_N
Motif
Other DBs
NCBI-GeneID:
123154688
NCBI-ProteinID:
XP_044429282
LinkDB
All DBs
Position
7A:352559832..352568949
Genome browser
AA seq
663 aa
AA seq
DB search
MMAAQVQASAAPAAGATEGGASPAAGAAAAAAPATAAAFPATSLYVGDLDVSVQDAQLFD
VFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEMLNFTPVNGKPIRIMYSNR
DPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEISGESKGYGFVQYEQD
ESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLREL
FGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAARAVEDLNGKKFDDKELYVGRAQKKS
EREMQLKENFEKSNKETADRNQGTNLYLKNLDSSVDDDEKLKELFAEFGTITSCKVMRDL
NGVNKGSGFVAFKSSEDASRALVAMNGKMVGGKPLYVALAQRKEERRARLQVQFSQMRPV
MPPPVAPRMPMYPPGVPGMGQQLFYGQPPPAFVNPQPGFGFQQHMIPGMRPGVAPMPNFV
MPMVQQGQQPQRPSGRRAGAGGMQQPMPMGHQQMVPRGGRGGYRYASGRGMPDAAFRGVG
AMGPSLYEMGRMTPGDTGAPQQVSSGALASALANSPPEQQRLMLGESLYPLVDQLEHDQA
AKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMEVLRSAQQQQTNVPADQLAALSLSDGF
VAS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggcgcaggttcaggcgtcggcagcgccagcggctggcgcgacggagggcggc
gcgtctccggcggctggggctgcggcagcagccgcaccagcaactgctgcggctttcccg
gcgacgtccctgtacgtgggggatctggacgtgagtgtgcaggacgcgcagctctttgac
gtcttcagccaggtcggctcggtggtgtctgtgcgcgtgtgccgggacgtcaacaccagg
atgtccctaggctacgcgtacgtcaacttcagcagccctgccgatgctgcaagggcattg
gaaatgctgaacttcactcctgttaatgggaagcctataaggataatgtattctaaccgt
gaccccagctcacgtaaaagtggtgctgcaaatatatttatcaagaatcttgacaagtca
atagataacaaagcgctctatgacacattttctgcctttggaaacattctttcatgcaaa
gttgctacagaaatatctggagaatccaagggttatggttttgttcagtatgagcaggac
gaatcagcacagaatgccatcaatgagctcaatgggatgcttttgaatgacaaaaaggtt
tatgttgggccttttgttcgtaaacaggaaagggaaaatgtttttggcagtcccaagttc
aataatgtctatgtaaagaatctatcagaatctaccaccgaagataatctgagagaattg
tttggtaattttggacctataactagtgttattgtagtgcgagccgatgatggtaaatcc
agatgctttggattcgtgaactttgaaaatccggatgatgctgcacgtgctgttgaggat
ttgaatggcaagaaatttgatgataaggaattatatgttggtagagctcagaagaagtct
gaaagggagatgcaattgaaggaaaattttgagaaaagcaataaagagacagctgacagg
aaccaaggcactaacttgtatttgaaaaacttggatagtagtgttgatgacgatgagaaa
ttaaaagaactttttgccgaatttggcactataacttcttgcaaggttatgcgggatttg
aatggggtaaacaaaggatctggttttgttgcatttaaatcttccgaagatgcttcacga
gctcttgtggcaatgaatggtaaaatggttggcggtaagcctctttacgtagcacttgcg
caacgcaaggaagaaagaagagccaggctgcaggtgcagttttcacaaatgcgtcctgtg
atgccaccgcccgttgctccgcgcatgcccatgtacccccctggtgttcctggaatgggc
caacagctattctatggccaaccacctccagcttttgttaacccacagcctggatttggt
ttccagcaacatatgattcctggaatgagacctggtgttgctccaatgccaaatttcgtc
atgccaatggtgcagcaaggtcagcaaccacaacgcccatctggaaggcgcgcaggtgct
ggtggaatgcaacagccaatgccaatgggtcatcagcagatggttccgaggggtggccgt
ggtggttaccgttatgcgtctggccgtggcatgcctgatgctgcattccgtggtgttgga
gctatggggccatcgctgtatgagatgggaaggatgactcctggtgacactggagcaccg
cagcaagtttctagtggagcattagcatctgcacttgctaactctccgccggagcagcaa
cgattgatgcttggtgaaagcttgtatccacttgttgatcagctggagcatgaccaggct
gccaaggttaccggtatgcttctggagatggaccagactgaggttcttcatctaattgag
tcacctgatgctctgaagtctaaggtcgctgaagctatggaggttctccgcagtgctcag
cagcagcagaccaatgttccagctgatcagctggctgctctttcgctgagcgatggcttt
gttgcttcttag
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