Triticum aestivum (bread wheat): 123156735
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Entry
123156735 CDS
T07757
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB1-1-like isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03022
Basal transcription factors
taes03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123156735
09124 Replication and repair
03420 Nucleotide excision repair
123156735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123156735
03400 DNA repair and recombination proteins [BR:
taes03400
]
123156735
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123156735
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123156735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
123156735
NCBI-ProteinID:
XP_044430842
UniProt:
A0A3B6SDY6
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Position
7B:complement(376563832..376574403)
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AA seq
598 aa
AA seq
DB search
MGTMTIGAKYKATLKDRGTGGVLRMSEDKLTFTPNDPRSLMKLSVDFRTIKGHKFNKVDG
SKPSPALLNLSKDSDKGGGYIFEFENVGNRDFCRDFVARVLGKHQGTVPARPNVPPEISA
VSTGPEQLSSAEMERRMKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLNDETNKAS
KQKPGFKSAMLADVRPSADGQTNKVTFSLTTEIIHQIFAEKPAVHRAFLDYVPKKLSEKD
FWTKYCRAEYLLRTKNTLAAKAEAADDEELAMFLKNDDILAKEAKLKIKRVDPTLDMEAD
AGDDYIHLPDHGILRDGSRETTDIDSELARRTLSQDLNRHAAVVLEGRSTDIESTDTKTV
AEALARSKKEPPPSSVADDASHVRLVKVARMTEIEDLQAPRSLPYAPLCIKDPREYFDSQ
QANALRPLGSNDGRKARSCSLSTDDAFRHLMDQISSVKMNCPVVQSDVALKVLNELNEGI
SRSRRLNLKNPQDSLLGRLPHRTRDELMDHWTAIQELLCHFWSSYPITTTVLCNKVQRLK
DAMTQIYQKLQDIKEAAQPDVRHEISQLVKPMTQALDAAFNHEQQQKSSKAGSKPNGF
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggggaccatgacgatcggtgccaagtacaaggccacgctcaaggaccgcggcaccggc
ggcgtcctccgcatgagtgaagataagttaacatttacccctaatgatccacgctcacta
atgaagctcagtgtcgattttcggaccatcaaaggccataagttcaacaaggtagatggt
agcaaaccatcaccggcattattgaatctttcaaaagattctgacaaggggggaggctat
atttttgagtttgagaatgttggtaaccgtgatttttgccgcgactttgtagctagggtt
ttaggcaaacatcaaggtactgtgcctgctagaccaaatgtacctcctgagatatcagct
gtgtcaactggtccagaacagctcagttctgctgaaatggaacggcggatgaaattgcta
cgagaagacagtgaactgcagaagttacataagaagtttgtgcttggcaatattctccaa
gagtctgaattttgggcaacaagaaagaatttacttaacgatgaaacaaacaaagcatca
aaacaaaagccaggtttcaaaagtgccatgctagctgatgttaggccatcggctgatgga
cagacaaacaaggttactttcagtctgactactgagattatccatcagattttcgcagaa
aagccagctgtgcatcgggcatttttagattatgtcccgaagaagttgtcagaaaaggat
ttttggacaaagtactgtagagctgagtatctacttaggacaaaaaatactttagcggca
aaagctgaggccgctgatgatgaggaattagccatgtttttgaaaaacgatgatatactt
gccaaggaggcaaagctcaagataaaacgagttgatccaacattagacatggaggcagat
gcaggggatgactacatccatcttccggatcatgggattctccgtgatggcagcagagag
acaactgatattgatagcgagttggctaggagaacactttctcaggatctgaatcggcat
gctgctgttgttcttgaagggagatcaacagatattgaatcaactgatacgaagactgtg
gctgaagcacttgcacggtccaagaaggaaccacctcctagctctgttgctgatgatgct
agtcatgtgagattggtaaaggtggcccgcatgactgagatagaggatctgcaagctcca
cgaagtctcccatatgcaccactttgtataaaggatcctcgagaatattttgattctcag
caagccaatgctctgagacctttaggtagcaacgatggaagaaaggcccgcagctgcagc
ctgagcaccgatgatgcattccgtcatttaatggatcaaatatcttccgtgaaaatgaac
tgtccggttgttcagtcagatgttgctctaaaggttcttaatgaattgaatgaaggaatt
tcacgttcacggaggcttaatcttaagaatccccaagacagtctccttggtcgtcttcct
caccgaacacgagatgaacttatggatcattggacggctatccaggagttgctgtgccat
ttttggtcatcatacccaataacaaccacagtcctttgtaataaggttcaacggcttaag
gatgcaatgacacagatatatcagaagttacaggatataaaggaagcagcacagcctgat
gtacggcatgaaatatctcaactcgtaaagcccatgactcaggcgctggatgctgcattc
aaccatgagcagcagcagaaatcttcaaaggccgggagcaagcccaatgggttttga
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