Triticum aestivum (bread wheat): 123156736
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Entry
123156736 CDS
T07757
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like isoform X1
KO
K12897
transformer-2 protein
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123156736
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
taes01009
]
123156736
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123156736
Protein phosphatases and associated proteins [BR:
taes01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123156736
Spliceosome [BR:
taes03041
]
Common components
Common spliceosomal components
SR proteins
123156736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
123156736
NCBI-ProteinID:
XP_044430844
UniProt:
A0A3B6SLG3
LinkDB
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Position
7B:731428097..731432374
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AA seq
278 aa
AA seq
DB search
MADSPRRRYTRPSRSPSPYKGRQKQMSRSRSPVAQSQSRSPSPDPRAQARSRSRSPARER
EPEAVNHGNTLYITGLSSRVTDKELREYFNKEGKVVSCHVVLEPHTRVSRGFAFITMDTV
EDAERCIKYLNQSELQGRNITVEKSRRGRPRTPTPGSYLGHRYERREMQRGGRFRRGGYG
RDDYYGNSYRRSPPPMYREYRDTRDYPPYRDTRDYSPPHRDARDYYDGRGGRGYSPHRSP
PPYGGRARRERSRSLPYSPYRMPERGYGRRAGGGGYDR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggccgactccccgcgccggaggtacacaaggccctcaaggtccccttctccttataag
ggacgccaaaagcaaatgtcaaggtcaagatcacctgtagcccaatcccagtctagatct
ccatcgcctgatcctagagctcaggcgaggtcaagatctcgaagccctgcgagggagcgg
gagcctgaagccgtaaatcatggaaatactctgtacattactggactttcttctagggtg
actgacaaagaacttagagagtacttcaataaggaaggaaaggtggtttcttgtcatgtt
gttcttgaaccccacacacgtgtttctcgtggatttgctttcatcaccatggacactgtt
gaagatgctgaacgctgcatcaagtatctcaaccagtcagaactgcaaggccggaacatc
acagttgaaaagtcacgcagaggccgcccaaggacgcctactcctgggagctatctgggc
catcgctatgagcgcagagagatgcagcgtggaggtagattccgcagaggaggctatggt
cgtgacgactactatggcaacagctaccgcaggtctccgcctcccatgtaccgagaatac
agggacacccgggactaccctccctacagggacacccgcgactactccccaccccacagg
gatgcccgagactactatgacggcaggggtggccggggctactccccccacaggtctccc
cctccttatggtggcagggcaaggagggagcggtctaggtcgctgccctactccccgtac
cgtatgcccgaaaggggctatggccgccgtgctggtggcggtggctatgacaggtga
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