Triticum aestivum (bread wheat): 123157464
Help
Entry
123157464 CDS
T07757
Name
(RefSeq) pre-mRNA-processing-splicing factor 8A-like
KO
K12856
pre-mRNA-processing factor 8
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123157464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123157464
Spliceosome [BR:
taes03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
123157464
Complex C
U5 SnRNP specific factors
123157464
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
123157464
NCBI-ProteinID:
XP_044431686
UniProt:
A0A3B6SC28
LinkDB
All DBs
Position
7B:complement(30604462..30614146)
Genome browser
AA seq
2365 aa
AA seq
DB search
MWNGGPPPPLPPLPPMAAAPPPPGTAGAGLPPPPPPPAAAPPQAGQPLTPAELEAQLVEK
ARKWHQLNSKRYGDKRKFGFVEAQKEDMPPEHVRKIIRDHGDMSSKKYRHDKRVYLGALK
FVPHAVYKLLENMPMPWEQVRDVKILYHITGAITFVNEIPWVVEPIYLAQWGSMWIMMRR
EKRDRRHFKRMRFPPFDDEEPPLDYADNLLDVEPLEAIQLELDPEEDGAVYNWFYDHNPL
VKTNFINGPSYRKWNLSLPIMATLYRLAGQLLSDLTDRNYFYLFDMESFFTAKALNMCIP
GGPKFEPLYRDMEKGDEDWNEFNDINKLIIRQPLRTEYRIAFPHLYNNRPRKVRLCIYHT
PMIMYIKTEDPDLPAFYYDPLINPITSTSKVDRREKKASEGDDEDDFSLPEGVEPLLNRF
PLYTDTTAAGISLLFAPRPFNMRSGRTRRAEDIPLVSEWFKEHCPPAYPVKVRVSYQKLL
KCYVLNELHHRPPKAQKKKHLFRSLQATKFFQSTELDWAEAGLQVCKQGYNMLNLLIHRK
NLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDANIQFRLGNVDA
FQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWA
PMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMH
DVLDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWT
NVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEAVAIYT
TTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQLQREELGLIEQAY
DNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGD
KRHLFPNWVKPADSEPPPLLVYKWCQGINNLQDIWDTSDGQCVVMLQTKFEKFFEKIDLT
LLNRLLRLVLDHNIADYVTAKNNVVLSYKDMSHTNSYGLIRGLQFASFIVQYYGLVLDLL
LLGLTRASEIAGPPQMPNEFLTYTDTKVETRHPIRLYSRYIDKVHIMFRFTHEEARDLIQ
RYLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWE
NGFVSVYSKDNPNLLFSMSGFEVRILPKIRMTQEAFSNTKDGVWNLQNEQTKERTAIAFL
RVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQELLDLLVK
CENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSKQTDVGV
THFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQSQNRRLTLEDLED
SWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNY
RTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIP
NRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKVHESVV
MDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAHRWQMSKPSLVSESKD
VFDQKASNKYWIDVQLRWGDYDSHDIERYTRAKFMDYTTDNMSIYPSPTGVMIGLDLAYN
LHSAFGNWFPGSKPLLQQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGE
IFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQ
KRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQ
LPFQACLKIEKFGDLILKATEPQMVLYNIYDDWLKSISSYTAFSRLVLILRALHVNNEKA
KMLLKPDKTIVTEPHHIWPSLTDEQWLKVECALRDLILSDYAKKNNVNTSALTQSEIRDI
ILGAEIAPPSQQRQQIAEIEKQSRETNQVTAQTTRTVNVHGDELIVTTTSPYEQAAFASK
TDWRVRAISATNLYLRVNHIYVNSDDIKETGYTYIMPKNILKKFICIADLRTQVAGFLYG
LSPQDNPQVKEIRCISIPPQHGTHQMVTLPSNLPEHEFLADLEPLGWMHTQPNEAPQLSP
QDLTSHAKILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWARGNKDNGSNPQG
YLPTHYEKVQMLLSDRFLGFYMVPDNAPWNYNFMGVKHDPLMKYSMKLGTPRDFYHEDHR
PTHFLEFSNIEEGEVAEGDREDTFS
NT seq
7098 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacggcgggccgccgccgccgctgccgccgctgccgcccatggcggccgcgccc
cctcccccgggcacggccggcgcgggcctgcccccgccccctcccccgccggccgccgcg
cccccgcaggccggccagccgctcaccccggcggagctcgaggcgcagctcgtcgaaaaa
gcccgcaagtggcaccagctcaactccaagcgctacggcgacaagcgcaagttcggcttc
gtcgaggcgcagaaggaggacatgccccccgagcacgtccgcaaaatcatcagggaccat
ggggacatgtcttcgaagaagtacaggcatgacaaacgtgtttatcttggagcactcaaa
tttgtgcctcatgctgtttacaaactactggagaatatgccgatgccctgggaacaagtt
cgcgatgttaagatcttgtaccatatcactggcgccataaccttcgtaaacgagatccca
tgggtagttgagcccatttacttggcgcagtggggctctatgtggatcatgatgcgaagg
gagaagagagataggcggcatttcaagagaatgcgctttcctccatttgatgacgaggaa
cctccactggattacgctgataatttgttggacgttgaaccactggaggctatacaactg
gagttggatccagaggaagatggagctgtgtataactggttttatgatcacaatcccctc
gtgaagaccaattttataaatggtcccagctataggaagtggaatctgtctcttcccata
atggcaacactttatcgccttgctggtcaacttttgtcagacttgactgatcggaattat
ttctatttgtttgacatggagtctttctttactgccaaagcacttaacatgtgcatccca
ggaggtccaaagtttgagccattgtaccgtgatatggagaagggggatgaggactggaat
gaatttaatgacatcaataaactcatcatccgtcaaccacttcggaccgagtacagaatt
gcgttcccgcacctgtacaataacaggccaaggaaagtgagactttgcatatatcatact
cctatgataatgtatatcaagacggaggatccagatctgcctgcattttattatgatcct
ctgataaatccgatcacttcaaccagcaaggttgatcgtcgggagaagaaagcaagtgaa
ggtgacgacgaagatgactttagtctccctgagggtgtggagcctcttttgaaccgattt
ccactttacactgacacaacagctgccggcatttcattgctttttgctccaaggcctttt
aacatgagatctggtagaacacgccgtgctgaggatatccctcttgtatctgagtggttc
aaagagcactgtccaccagcgtatccagttaaggtccgggtgagctaccagaagctgctg
aagtgctatgtgctcaatgagctacatcacaggcctccaaaagcacagaagaagaaacat
ctgttccgttcactgcaagcaacgaagttcttccaaagtacagagcttgattgggcagaa
gctgggttgcaagtttgcaagcagggctacaacatgcttaacttgttgattcacaggaag
aatctgaactatcttcacttggactacaatttcaatttgaagcctgtgaagacactcaca
acaaaagagagaaagaaatctcgttttggaaatgctttccacttgtgtcgtgagattctg
cgacttacgaagctggttgttgatgcaaacatccaatttcgcttgggaaatgttgatgcc
tttcagttggctgatggtctgcaatacatattctctcatgttggtcagttgaccggtatg
tacagatacaagtatcgcctgatgcggcaaattaggatgtgcaaagatctgaagcacttg
atatactaccgtttcaacactggtcctgttggaaaaggacctggctgtggtttttgggct
ccaatgtggagagtgtggctattcttccttcgtggtattgtgcccttgcttgaaaggtgg
ctaggtaatttgttggccaggcagtttgaaggtcgccattcaaaaggagttgctaaaaca
gtaaccaagcaacgtgtcgagtctcactttgatttggaacttcgagctgcagttatgcat
gatgtccttgatgctatgccagagggcatcaagcaaaacaaggcccggactatactgcag
catcttagtgaggcatggcgctgctggaaggcaaatatcccctggaaggtccctggcctg
ccagttcctattgagaacatgatactccgttatgtgaagtccaaggctgattggtggaca
aatgtcgctcactacaaccgtgagcgtatccggcgtggtgctaccgttgacaagactgtc
tgccgcaaaaatcttggaaggttgactcgtttgtggctgaaggcagaacaagagaggcaa
cacaactacttgaaagatgggccatatgtgacgcctgaagaagcagttgctatttataca
accacggtccattggctggagtcaaggaagttctcaccaattccttttcccccactctca
tacaagcatgataccaaacttcttatattggcactggaaaggctaaaagagtcatacagt
gtggcagtaagattaaatcaactgcagcgagaggaactgggtttaatagagcaagcatat
gataatccacatgaagctttgtcaaggataaaacgacatcttcttactcagcgtgctttt
aaagaagttggtattgagtttatggatctgtacagctacctgatcccggtatatgaaatt
gagcctcttgagaaaattactgatgcataccttgaccaatacttgtggtatgaaggggac
aaacgccacctcttcccaaattgggtaaagcctgctgattcagaaccacctcctctactt
gtttataagtggtgccaaggtataaataatttgcaggacatatgggacactagtgatggg
cagtgtgttgtgatgctgcagacaaaatttgagaagttctttgaaaaaattgatctgact
ctgttgaacaggcttctacggttggtcttggaccacaacattgctgattatgtcactgca
aagaataatgttgtgctgtcttacaaggatatgagtcacacaaattcttatggacttatt
cgaggtcttcagtttgcatcttttattgtgcagtactatgggctggtgctggatctccta
cttcttggtttaacacgagccagtgagattgcagggccgcctcagatgccaaatgagttc
cttacatatactgacactaaagttgagacaaggcatcccatcaggctgtattctcgatat
atcgataaggtgcatataatgttcaggttcactcatgaagaggcaagggatttgattcag
cgttacttgacagagcatcctgatcctaataatgagaacatggtcggttacaacaacaag
aaatgttggcctagagatgcaagaatgaggctcatgaagcatgatgttaatctgggaaga
agtgtattttgggatatgaagaatcgcctgccaaggagcattactacattagaatgggag
aatggctttgtctctgtatacagcaaggataacccaaacctgctctttagcatgtctggg
tttgaggtccgtatactgccgaagatacgtatgactcaggaggcattcagcaacacaaaa
gatggagtatggaacttgcagaatgagcagacaaaagaaaggacagctattgcatttttg
agggttgatgatgaacacatgaaggtgtttgagaaccgtgtcaggcaaatccttatgtca
tcaggatcaacgacatttaccaagatagtcaacaagtggaacactgctctcattggcctc
atgacatatttccgtgaagcaactgttcatacacaggaactactggatctgcttgtaaaa
tgtgaaaacaagattcagactcgcataaagattggcctgaactcaaagatgcccagcagg
tttccaccagttatcttctatacgcccaaggaaattggaggtttgggtatgttgtcaatg
ggtcacattttgataccacagagtgatcttaggtatagcaaacagacagatgttggtgtg
acacattttcgaagtggtatgagtcatgaagaggaccagcttatccccaacttgtatcgc
tacatccaaccatgggagagcgagtttattgattctcagcgtgtttgggctgagtatgct
ttgaagaggcaggaagcacaatcgcagaataggcgcttaacacttgaagatctggaagat
tcatgggatagaggcataccccgtatcaacactttattccaaaaagaccggcacactttg
gcctacgacaaggggtggagggtgcggacagactttaagcagtatcaagtgctgaaacag
aacccattctggtggacacatcagcgacatgatggaaagctgtggaatctgaataactac
agaactgatgtcatccaagcacttggtggtgtggaaggtatcctggaacataccttattt
aaaggaacatatttccctacttgggagggtttgttttgggagaaggcttcaggttttgag
gaatcaatgaagtacaaaaagctgacaaatgcacagcgttctgggcttaatcaaatcccc
aacagaagatttaccctctggtggtcgccaaccattaatcgtgcaaacgtatatgttggt
ttccaggttcagctagatctgacagggatattcatgcatggtaaaattccaaccctgaag
atctctctgattcagattttccgtgcacatctttggcagaaggtccacgaaagtgttgtt
atggatctttgccaagttctggatcaggagttggatgcgctggagattgagacagtacag
aaggagacaatacatcccaggaagagttacaagatgaacagttcatgtgcagatgtcctc
ctttttgctgcacataggtggcagatgtccaaaccaagcttagtttccgagtcaaaggat
gtcttcgatcagaaagcgagtaacaagtactggattgatgtgcaactacgatggggagac
tatgattcacatgacatagaacgttatacaagagcaaaatttatggactacacgacagat
aatatgtccatctacccttctccgactggagtgatgattggacttgatctagcttataat
ttgcactctgcttttggcaattggttccctgggtcaaagcccctcctccagcaagcaatg
aacaagatcatgaagtcaaatcctgctctgtatgtgctgagggagagaataagaaaggga
cttcagttgtattcatctgaacccactgagccgtatctgtcttcacagaactatggagag
atattcagcaatcaaatcatatggtttgtggatgacacgaatgtctaccgagttaccatt
cacaaaactttcgagggtaacctgaccaccaaacccatcaacggtgctatctttattttc
aatccaagaaccgggcaactatttctgaaggtcatccacacaagtgtatgggcaggacaa
aagcgtctagggcagctggccaagtggaaaactgccgaggaggttgctgcattagttcgg
tctcttcctgtagaagagcagccaaagcaaattattgtgacaaggaagggtatgttggat
ccactggaagtccatctgcttgatttccctaacattgttatcaagggtagtgagttgcag
ctgccattccaagcttgcttgaagattgagaagtttggtgatcttattctcaaggctaca
gaaccgcagatggttctttataacatatacgatgactggctgaaaagtatctcgtcctac
accgcattctctcgtcttgtgcttatattaagagcattgcatgtcaataatgagaaggct
aagatgttgctgaagcctgacaagacgattgttacggaaccacatcatatctggccatct
ttgactgacgagcagtggctgaaggtcgaatgtgcgctcagggatctcattctttccgat
tatgcaaagaaaaacaacgttaatacttctgcacttacgcaatctgagattcgtgatata
atacttggtgctgaaatagctccaccgtcacagcagaggcaacagatagctgagattgag
aaacagtcccgagagacaaatcaggtaactgcacagacaacgaggacagttaatgtgcat
ggagatgagctcatcgtcacgacgaccagtccgtatgagcaagcagcatttgcatcgaag
acagattggcgtgtcagggccatctctgctacaaacctgtatctccgtgtcaaccacatt
tatgttaactcggatgatataaaggagactggctatacttacatcatgccaaagaatata
ttgaagaagttcatatgcatagcagatctacggacacaggttgcaggtttcctgtatggg
ctgagtccacaggataatccccaagtcaaggagatcagatgcatatccattccgccacag
catggaactcaccagatggtgactttgccatcgaatctcccagagcatgagttccttgct
gacttggagccgttgggatggatgcatacccagccgaatgaagctcctcagctatcacct
caggatttgacatcacatgctaaaattttggagaacaacaagcagtgggatggtgagaag
tgcatcattttgacctgcagcttcaccccaggatcgtgctcgttgactgcatacaaattg
acaccaagtggttatgagtgggcccgtggcaacaaggacaacgggagcaacccacaaggg
tacctcccaactcactacgagaaggtccagatgcttctcagcgaccgcttccttggattc
tacatggttccggacaacgctccgtggaactacaacttcatgggagtcaagcacgacccg
ctgatgaagtacagcatgaagctgggcacaccccgcgacttctaccatgaggaccacagg
ccgacgcacttcctggagttcagcaacattgaggagggtgaggtcgccgagggggacagg
gaggacaccttctcgtag
DBGET
integrated database retrieval system
