Triticum aestivum (bread wheat): 123157918
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Entry
123157918 CDS
T07757
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123157918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123157918
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123157918
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123157918
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
123157918
NCBI-ProteinID:
XP_044432042
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All DBs
Position
7B:complement(360042919..360044114)
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AA seq
294 aa
AA seq
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MSAPPPPASSDDDGKPADEEGVEIREVWANNLEAEFAVIRDIVDDYPYIAMDTEFPGIVC
RPLGSFRSNDEYNYATLKANVDMLSLIQLGLTLSDENGALPARGTGGRPCTWQFNFRGFD
PRSDPANADSIDLLRNSGIDFDRFTTEGADTGHFAELLMSSGVLLNAELQWVTFHSGYDF
GYLLKLLTGRNLPDTMPGFFDLIRIYFPVLYDIKHLMKYCGSLHGGLSKLGELLGVQRVG
ICHQAGSDSLLTLRCFKKLKEAYFRGSTENYAGVLYGLISDGGENRPPAALLIE
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccccgccgccccccgcctcctccgatgatgatggtaagcccgccgacgaggag
ggcgtagagatccgcgaggtatgggcgaacaacctcgaggcggagttcgccgtgatccgt
gacatcgtcgacgattacccgtacatcgccatggacaccgagttcccgggcatcgtgtgc
cgcccgctcgggagctttcgctccaatgacgagtacaactacgccaccctcaaggccaac
gtcgacatgctgagcctcatccagcttggtctcaccctctccgacgagaacggcgcactc
ccggccaggggcaccggggggcgcccctgcacctggcagttcaactttcggggcttcgat
ccgcgctcagaccccgccaacgctgactccatcgacctgctacgcaacagcgggatcgac
ttcgaccgcttcaccaccgagggtgctgacacaggccacttcgccgagctgctcatgtcg
tcgggcgtcctgctcaacgctgagctccagtgggtcacattccacagtgggtacgacttc
gggtacctgctcaagctgctaaccgggcggaacctacccgacaccatgcctggattcttt
gacctcatcagaatctacttccctgtgctgtacgacatcaagcatctcatgaagtactgc
ggcagcctccatggtggcttgagcaagcttggtgagctacttggtgtccaacgtgtgggg
atctgccaccaggctgggtccgactcgctgctgaccttgcggtgcttcaaaaagctgaag
gaggcatatttcagaggatcgaccgagaattatgccggtgtattgtatggtcttatttct
gatggtggggagaacagaccaccagcagctctgctcatcgaatga
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