Triticum aestivum (bread wheat): 123160596
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Entry
123160596 CDS
T07757
Name
(RefSeq) U3 small nucleolar RNA-associated protein 21 homolog
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123160596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
taes03009
]
123160596
Ribosome biogenesis [BR:
taes03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
123160596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
EIF3I
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_EIPR1
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_WDR75_2nd
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_NWD2_C
VPS8_N
PROPPIN
Nucleoporin_N
Beta-prop_DCAF12
Nbas_N
Utp12
BCAS3_WD40
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
123160596
NCBI-ProteinID:
XP_044434334
LinkDB
All DBs
Position
7B:complement(710497752..710505687)
Genome browser
AA seq
906 aa
AA seq
DB search
MGIFEPFRAIGYITTGGVPFSLQRLGTETFVTVSVGKAFHVYNCAKLTLVLAGPQLPKKI
RALASFKEYTFAAYGSDIAVFKRTDLVVTFTKHEEKVNMLYLFGEYILSADTKGDIFIWA
FRGAKPSSEPVGNISLGDKFTPTCIMHPDTYLNKVIIGSEEGPLQLWNISTKKKVYDFKG
WDSSVRCCVSSPALDMVAVGCSDGSIHVHNIRYDEELMSFNHEIRGAVTALSFRTDGQPL
LASGGSSGVISIWNLEKRRLHSVIREAHDGSIVSLHFFANEPILMSSAADNSIKMWIFDN
NEGDARLLRFRSGHSAPPRCIRFYGNGKFILSAGQDRAFRLFSVVQDQQSRELSQRHVAK
RAKKLRVKEEEIKLKPVIAFDCAEIRARDWCNVVTCHMDTSKAYVWRLQNFVIGEHILTP
SSETESPIKACTISACGNFTILGTEGGWIEKFNLQSGISRGSYIDGSLSLQCAHEGEVVG
LACDATNGSLISAGYRGDIKVWDFKSCKLKSKFNVGKSVTKIAYHRANGLLATVADDMVL
VLFDTVSMKMVRRFEGHTDRITDLCFSEDGKWLISSSMDGTLRIWDISLARQIDAMRVDV
SITSVSMSPNMDVLATTHVDQNGVYLWVNQALFSPSTNVDSYASGKHVRNVLLPTVSSAE
RSEEEEPIKKSQDSNQSNIKPFVIMDHQIPNMITLSLLPRSQWQSLTNLDIIKVRNKPIE
PPKKPEQAPFFLPTVPSLSGEILFEPPSSKETDGSTTEDIGHKKMADLSSYFSRLLQSCG
ELESYSAFTDYLKGLSPSSLDMELRMLQLIDDDEVEESEEPRPELQSISLLLDYFIHELS
CRNNFEFVQAVLKLFLKIHGETIRRHSTLQEKARKLLDVQSKVWQKIDKMFQSSRCMVTF
LSNSQF
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggggatcttcgagccgttccgcgcgatcgggtacatcaccacgggcggcgtgcccttc
tccctgcagcgcctcggcaccgagaccttcgtcaccgtcagcgtcggcaaggccttccac
gtctacaactgtgccaagctcactttggtccttgccggacctcaactgcccaagaagatc
cgcgccctcgcatccttcaaggaatacacctttgctgcatatggaagtgatatcgcggtt
ttcaaacggaccgatctggtggttacctttactaaacatgaagaaaaggtgaacatgttg
tacctgtttggagaatacattctcagtgcagatactaaaggtgatatatttatctgggcc
ttcagaggagctaaaccaagcagtgagcctgttggaaacatatcactgggagacaagttt
actccaacctgcattatgcatccagatacttacctaaataaggtcattattggtagtgaa
gaaggaccattgcagctgtggaatatcagcacaaagaaaaaagtatacgattttaagggt
tgggattcatcagtacgttgttgtgtttcttcacctgctctggatatggttgcagtcggt
tgctcagatggatcaattcatgttcacaatatacgatatgatgaagagttgatgtctttc
aaccatgaaattcggggtgccgtaactgccctgtcatttcgaacagatgggcagcccctt
ctagcgtctggaggttcctcgggtgttattagcatttggaatcttgagaagagaaggctg
cactctgtgattagggaggcccatgatggttctattgtatcacttcatttttttgccaat
gaacctattttgatgagctcagcagctgataattcaattaaaatgtggatatttgataat
aatgaaggagatgctcgtctgttacgatttcgaagtgggcatagcgctccacctcggtgc
ataagattctatggcaacggaaaattcatcttatccgctggtcaagaccgtgccttccgt
cttttctcagttgttcaggatcaacaaagcagagagctttctcagcggcatgtggcaaaa
agagcaaaaaagcttagagtaaaggaggaagagataaagctaaaaccagttattgcattt
gattgtgctgagatacgtgcacgtgattggtgtaatgttgttacatgccacatggatact
tcaaaggcatatgtatggcgtcttcagaactttgttataggcgaacatattcttacacca
tcgtcagagactgagtcaccgattaaggcttgtactataagtgcatgtggtaattttact
atcttgggcaccgaaggtggttggatcgaaaaatttaaccttcaatctgggattagtcgt
ggtagttacattgatggctcgctgtcattgcaatgtgcacatgaaggggaagttgttgga
ttagcatgtgatgctacaaatggttctctgattagtgctggataccgtggggatattaag
gtgtgggattttaaaagttgcaagctaaaatccaaattcaatgttggtaaatctgtaact
aagattgcatatcaccgagcaaatggtcttcttgctacggtagcagatgatatggtgctt
gtattgtttgatacagtgtcaatgaaaatggttcgtagatttgaaggacatacagaccgc
atcactgatctgtgtttcagtgaggatgggaaatggctcatctcatctagtatggatggg
acgctcagaatatgggatatcagtttagcaagacagatagatgcgatgcgtgttgatgta
tctataacatctgtctccatgtctcctaatatggatgtgttggcaaccacccatgttgac
caaaatggcgtgtatctttgggttaatcaagctttgttctcaccttcgacaaatgttgat
agctatgcaagtggtaaacatgtccggaacgtgcttttgccaactgtttcatcagccgaa
agatctgaggaggaagaacccattaaaaaatcacaagattcaaatcaatctaatattaaa
ccttttgtcataatggatcatcaaataccaaatatgatcacactctcattactcccaagg
agtcaatggcaaagcttgacaaatcttgacattataaaggttcgaaacaaaccgatcgag
ccacctaagaaacctgagcaggctccatttttcttgcccacagttccatccctttctggg
gagatattgtttgagcctccttccagtaaagaaacagacggcagcactactgaggacata
ggtcataaaaagatggctgatctctcctcctacttcagtcggctgttacaatcctgtgga
gaacttgagagctattcagcgttcactgactacctaaaaggcctatctccgtcatctcta
gacatggaactacggatgctacagttaatagatgatgacgaggtggaagagtcggaggaa
ccaagacccgagctccagtccatctcgttgctgctggactacttcattcacgagctttcc
tgcaggaacaacttcgagtttgttcaagctgttctgaaattgtttctgaagatacatggt
gaaacaatacggcgccactcgacgctacaggagaaagcgaggaaactcctggacgtccag
agcaaggtctggcagaagatcgacaaaatgtttcagagctcgcgatgcatggtcacattc
ctcagcaactcgcagttttag
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