Triticum aestivum (bread wheat): 123161227
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Entry
123161227 CDS
T07757
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123161227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123161227
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123161227
mRNA degradation factors
5'-3' decay
Decapping complex
123161227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
DUF445
Beta-prop_EML_2
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
123161227
NCBI-ProteinID:
XP_044435009
UniProt:
A0A3B6SHS2
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Position
7B:154313518..154322015
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AA seq
1308 aa
AA seq
DB search
MASPSGNPNPNPNVPFELSRLFKPPPNPNHLTTVPTPTGIFPGAPPGAPMATGPPGPYSY
PPATPPFHRNPYLNYPTDPNAVHLPVAAFANPNPAANPIPNHSPGPNPGARLMQLLGNTA
PTHLESVVSMPPTSSEFSGGPVAPLPAMPSAPPARMTSTSSKMPRGRLLGPGDRAVHDVD
SRLPGEAQPPQLEVTPITKYTSDPGLVLGRQIAVNRTYIVYGLKLGNIRVLNINTALRSL
LRGHTQRVTDMAFFAEDVHRLASASVDGRIYVWKIDEGPDEENKPQITGKIEMAIQIVGD
AGTYHPRICWHSHKQEILFVGIGNCVLKIDTTKVGRGRDFSKEEPLKCSLDKLIDGVHLV
GKHDGDVTDLSLSQWMTTRLASASKDGTVKIWDDRRTVPLSVMKPHDGKAVYSVSFLTAP
EQPNHINLVTAGPLNREVKIWASSDKEGWLLPSESETWRCTQTLELVSSLENRFEEAFFN
QVAVLPQASLILLANAKKNAIYAIHVEYGPDPASTRLDYIADFTVAMPILSLTGTHESQP
DGEHVVQVYCVQTMAIQQYGLELSLCLPPTADNAGLGRDLAISHVYERPLEVASVEPSTE
TKPLSDHQGTEADTATHVSSPTPSSNLDNAGSYAEAVLRRDASRGPSLGDHDGDKSSFDY
SKKRMDSDGTSGQGAFDRKDCFGNEEPRGGHVDGTVSDPHPTFKVGVNATHLITPSEIIS
GVLPSAESTANGSPQNVEMESKLVVEEKADQNIGFEDVKETQIVQEKMERLNMSSEQTVQ
TISERSVTTDKYSVEDSQRSDPTLLKQHSGARDENLPRRTAEATENINGSSSRNLQLPSA
TKEEKVLHPQVSGQMSPITSTFNSTDSSHEHPSNTNPAIDSVPQVAAIQGTLQQLMAMHT
DMQKQLNAIVSAPIAKEGKRIETSLGRNIEKSIKANVDAMWARIQEENARHEKVERERMQ
QISTLITTSVNKDIPAILEKSLKREISLLGPTIARTTTPIIEKSLSSAVSDSLQKVLGEK
VANQLDKSISTKLEATVAKQIQTQFHTSAKQALQDALRSSFESSIIPAFEQSCKTMFEQV
DGAFQKGMSEHGTAIQQQVAAAHSPLAQTLRETINSASSITQGLTSELLDGQRKLLALVA
SGNPISHNTSALQPINGPIPNLPEADVPLDPMKELTRLLSEQKFDEAFTMALQRSDVSMV
SWLCSQVDLQGLCRLNPVPLNQGVLLALFQQLACDIANDTPLKLQWMTAVAMAIQPTHQM
IAAHVRPIFEQVYGVLARQQSVPGTTPLEANNIRLMMHVINSVMMTHK
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgccctccggaaaccctaatcccaaccccaacgtccccttcgagctcagcagg
ctcttcaagcctcccccaaaccctaaccacctcacaaccgtgccgacccccactggcatc
ttcccgggcgccccgcccggcgcgccgatggccaccgggccgccgggcccctactcctac
ccgcccgccaccccgcccttccaccgcaacccgtacctcaattaccccaccgaccccaac
gccgtccacctccccgtcgccgccttcgcgaaccctaaccccgccgcaaaccctatccct
aaccacagccccgggcccaatccgggagctcggctcatgcagctgctgggcaacaccgcg
cccacccatctcgagtccgtggtgtccatgccgcctacgtcatcggagttctctggcggc
ccggtggcgccgctgccagcgatgccgtcagcaccgccggcgaggatgacaagcacaagc
agcaagatgccccggggcaggctgctgggaccgggggacagggccgtgcacgacgtggac
tcgcggctgccaggggaggcgcagccaccacagctggaagtgacgcccatcaccaagtac
acctcggacccggggttggtgctgggccggcagatcgctgtaaaccgaacgtacatcgtg
tatggcctcaagcttggcaacatccgcgtgctcaacatcaacaccgcactccgctcgctc
cttcgtgggcacacacagagggtgacggacatggctttctttgcagaagatgtccatcgt
ttagcaagtgcaagcgtagatgggcgtatatatgtatggaagattgacgagggacccgat
gaggaaaataaaccacaaatcacaggaaagattgaaatggccatccagatagtaggagat
gctggaacttaccatccaagaatatgttggcactcccataagcaagaaattctgtttgtt
ggaatagggaactgtgtcttaaaaatagacacaacaaaagtgggaagaggaagagacttc
agtaaagaagagcctcttaaatgttcacttgataagctcattgatggtgtgcacttggtc
ggtaaacatgacggggatgtcacagatctgtccttatctcaatggatgactacccgtctg
gcttcagcatcaaaagatggcacggtaaaaatctgggatgatcgcaggacagtgccttta
tctgtgatgaaaccgcatgatggtaaagctgtttattcggtttctttccttacagcacca
gagcaaccaaatcatataaatctcgttacagcggggcctctcaaccgagaagtaaaaatc
tgggcttcctctgataaggaaggttggttgttgccaagtgaatctgagacttggagatgc
actcaaactctggaacttgtgagttctctggaaaataggtttgaggaagcatttttcaac
caagtagcagtgttgccacaagctagccttattttgcttgcgaatgccaaaaagaacgct
atatatgctatccatgttgagtatggtccagatcctgcttctactcgtctggactatata
gcagatttcacagttgcaatgcctattttaagtctgacgggaacacatgaaagccagcct
gatggtgaacatgtagtacaagtctattgtgtccagacaatggctatccagcagtatgga
ttggagttatcactctgtttgcctcctacagctgataacgctgggcttggtagggatctg
gctatttcccatgtatatgagagacctctagaagtagcatcagtggagccatcgacagaa
actaaaccactgagtgatcatcagggaacagaagctgatactgctactcatgtttcatcc
ccaactccttcatcaaacttggataatgctggatcttatgcagaagctgtcttgagaaga
gatgcttcaagaggtccatctcttggtgatcatgatggggacaagtcatcttttgattat
tcaaagaaaaggatggattctgatggtacaagtgggcaaggagcatttgataggaaggat
tgctttgggaatgaagagccaagaggtggccatgttgatggtacagtttcagatcctcat
cccacgtttaaggtcggagtgaatgccacacacttgattaccccatctgaaattatttca
ggtgtgctcccatctgctgaatcgactgctaatggcagcccacagaatgtagaaatggag
tcaaaacttgtggttgaggaaaaagcagatcaaaatattggatttgaggatgttaaggag
acccaaattgttcaagagaaaatggagagacttaacatgtcttcagagcaaactgtacag
acaattagtgaacgctcggtaacaactgacaagtacagtgtggaagattcacagagatca
gaccccacacttctgaaacaacattctggtgctcgggatgaaaatcttccaagaagaaca
gctgaagctactgaaaacatcaatggctcttcgtcaaggaacttgcagttaccctcagct
accaaagaggagaaagttctgcatcctcaggtttctgggcagatgtctcctattacaagc
actttcaactctactgattcatcacatgaacatccaagcaatacaaaccctgccattgat
tctgtcccgcaagtagctgccattcaaggaacattgcaacagcttatggcaatgcatact
gacatgcaaaagcagctgaacgcaattgtgtctgctcctattgcaaaggagggcaaaagg
atcgagacatcactcgggcgtaatattgagaagtccataaaggctaacgttgatgccatg
tgggctcgtatccaggaggaaaatgcaaggcatgaaaaggttgaaagagagcgaatgcag
cagatttctactctaatcacaacttctgtaaacaaggacattcctgctatactggagaaa
tcactaaagagagaaatatcgttgttgggacccaccattgcacgaacaacaacacctatc
attgagaagtccttgtcttctgctgtttcggattcgcttcagaaagttctcggggaaaag
gttgcgaatcagctggataagtccataagtacgaaacttgaagctactgttgctaagcag
atccaaacacagttccatacatctgccaagcaggcacttcaggatgctttacggtcaagc
tttgagtcatcaattatcccagcatttgaacaatcttgtaagacaatgtttgagcaagtg
gatggtgcattccagaagggcatgtccgagcatggtactgctatccagcagcaggttgca
gcagcacatagtccattggcacagactttaagggaaacaatcaattcagcatcatcaatt
acccagggtcttacatcagagttacttgatggccagcgcaagcttttggcactagttgca
tcagggaacccaatatcacataatactagtgcattgcagcccatcaacggaccaatacct
aatctccccgaggctgatgttccactggacccgatgaaggagctaacgagattattatct
gagcaaaaattcgatgaggcgtttacgatggctcttcaaagaagtgacgtctccatggta
tcttggttgtgctctcaggttgatttgcaagggttgtgtagactgaaccccgttcctctg
aaccaaggggtccttctggcccttttccagcaactggcatgcgacatagccaacgacaca
cccctgaagcttcaatggatgacagcggtcgccatggcaatccaaccaacccatcagatg
attgcagcgcatgtgaggccaatatttgagcaagtctatggcgtcttggcccgccaacag
tcggtgccaggaaccaccccactggaagcgaacaacatccgcctaatgatgcatgtaatc
aactcggtgatgatgacccacaagtga
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