Triticum aestivum (bread wheat): 123161401
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Entry
123161401 CDS
T07757
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123161401
09123 Folding, sorting and degradation
03018 RNA degradation
123161401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123161401
03041 Spliceosome [BR:
taes03041
]
123161401
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123161401
mRNA degradation factors
5'-3' decay
Lsm complex
123161401
Spliceosome [BR:
taes03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
123161401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
123161401
NCBI-ProteinID:
XP_044435177
LinkDB
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Position
7B:484646960..484649279
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AA seq
104 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVIGTLKGYDQLLNLVLDEAIEFEREQDDPLKL
STKTRQLGLIVCRGTAVMLVSPTEGTEEIKNPFQEADGEQTAHS
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggcgcaaggagacggtgctggacctggccaagttcgtcgacaagggcgtccag
gtcaagctcaccggcggcaggcaagttataggaactttgaagggctatgaccagcttctg
aacttggtgcttgatgaagcgattgagtttgaaagagagcaagacgatccactgaaactg
tcaacaaaaaccagacagcttggtctcattgtctgcaggggcacagcggtgatgctcgta
tcaccaaccgagggaacagaggagatcaaaaaccccttccaagaggctgatggagaacaa
accgctcactcctag
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