Triticum aestivum (bread wheat): 123161842
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Entry
123161842 CDS
T07757
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 52A-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123161842
03041 Spliceosome [BR:
taes03041
]
123161842
03036 Chromosome and associated proteins [BR:
taes03036
]
123161842
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123161842
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123161842
mRNA cycle factors
Common to processing body (P body) and stress granule
123161842
Spliceosome [BR:
taes03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123161842
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
123161842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
SBP_bac_11
Motif
Other DBs
NCBI-GeneID:
123161842
NCBI-ProteinID:
XP_044435598
LinkDB
All DBs
Position
7B:complement(471516702..471522688)
Genome browser
AA seq
642 aa
AA seq
DB search
MASSDVWGDDPAGGEWTTVTRSGRPSHAGAAGRSPNAKRAAPRPPKPAAPTVVEVGEGLA
GLDVEGASRTGRLDKYDIPVEVSGDGAPAPADGFEQAGLAEAVLRNVARCGYDNPTPVQR
YSIPIVLSGRDLMACAQTGSGKTAAFCLPVVSGLVAAAAEGGQGGGGGRGDRDAYDYDYR
RAARPLALVLAPTRELAAQINEEAKKFAHKTGLKVKVAYGGTSMVQQLRDIEKGADILVA
TPGRLVDMIERGKISLEAIKYLIMDEADRMLDMGFEPQIRKIVDGMGMPRKSVRQTMLFS
ATFPPEIQRLASDFLSKYIFITVGRVGSSTDLITQQVEFVTNDEKRTYLIDLLQKQSFTS
SDGKPQQPLTLVFVETKREADSLRYWLYNKGFPATAIHGDRTQEERESALRSFKSGLTPV
MVATDVVARGLDVPNVAHVINYDLPKSIEDYVHRIGRTGRAGNAGSATAFFTESNHPIAK
ALLELMTEAKQNVPTWLEDYAGKPFYGGSSFGGRGRRSNGDGGSSFGGRDYRGGSGGGGD
RYSGGGGGGGGGDRYSGGGGGKSYSGGGGGDRYSGGGGGDRYSGGSGGDSYSGGGGGKSY
SGGGGGSRYSSGGGSSRESDPPPRYYPSYPMGTSNISASGWD
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtccgacgtgtggggcgacgacccggccggcggggagtggaccaccgtcact
cgctccggccggcccagccacgccggcgcggccgggcgctcccccaacgccaagcgggcc
gctccccggccccccaagccggccgcgccgacggtggtcgaggtcggcgaggggctggcg
gggctcgacgtcgagggcgccagccggacagggaggctggacaagtacgacataccggtg
gaggtgagcggcgacggcgcgcccgcgccggcggacgggttcgagcaggccgggctcgcg
gaggccgtgctcaggaacgtggccaggtgcggctacgacaaccccacgccggtgcagcgc
tactcgattccgatagtgctgtccgggagggacctcatggcgtgcgcgcagaccgggtcc
gggaagacggccgcgttctgcctccctgtggtgagcgggctggtggcggcggcggcggag
ggagggcaaggtggcggagggggtcgcggcgacagggatgcgtacgactacgactaccgc
cgcgcggcgaggccactcgctctcgtgctcgcgcccaccagagagcttgcagcgcagatt
aatgaggaagcaaagaagttcgctcacaaaactggactcaaagttaaggtggcctatgga
ggaacttcaatggttcaacagttacgtgatatagagaaaggcgcagatattcttgttgct
acacctgggcgccttgtggacatgattgaaagaggaaagatctctcttgaggcaattaag
tacctgataatggacgaggctgacaggatgctggatatggggtttgagcctcagataagg
aagattgttgatgggatgggtatgccacgaaagtcggtgagacaaactatgctgttcagt
gcaaccttcccaccagaaatacagagactggcttcagactttttgtcaaagtacatattt
atcactgttgggagagtgggttcaagtactgacctaattacgcagcaagttgagtttgtc
actaacgatgagaaaagaacctacctgatagatctcttacagaaacaatctttcacttca
tctgatggcaagcctcagcagcctctaacattggtttttgtggagacaaaacgagaagct
gattcattgaggtattggctatacaacaaaggtttccctgcaacagcgatccatggtgac
agaacacaagaggagagggaaagcgcactgagatctttcaagtctggcttgacccctgtc
atggtcgccactgatgtagtcgcgcgaggcctggatgttcctaatgttgctcatgtcatc
aactatgatcttcccaagagcatagaggattatgtccacaggattggaagaactgggaga
gctggaaatgctgggagtgccaccgccttcttcactgaatccaaccaccccatcgcaaag
gcattactggaactgatgaccgaggcaaaacagaatgttcctacctggctagaggactac
gcagggaagccattctatggagggtcaagcttcggcggaagaggccgaaggtccaatggc
gatggtggcagcagctttggtggcagagattatcgcggcggttccggtggcggcggcgat
cgctactccggtggtggtggtggtggtggtggtggtgatcgctactccggtggtggtggt
ggcaagagctactctggtggcggtggtggtgaccgctattctggtggtggtggtggtgac
cgctactccggtggaagtggtggtgacagctactccggcggcggtggtggaaagagctac
tctggtggtggtggtggtagcagatactccagtggcgggggctcctccagggaaagtgat
ccacctccacgctactacccttcctaccccatggggacatcaaacatcagcgcctctggc
tgggactag
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