Triticum aestivum (bread wheat): 123163720
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Entry
123163720 CDS
T07757
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123163720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123163720
03036 Chromosome and associated proteins [BR:
taes03036
]
123163720
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123163720
Coactivators
SAGA/TFTC/STAGA complex
123163720
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
123163720
STAGA complex
123163720
TFTC complex
123163720
SAGA complex
123163720
SLIK complex
123163720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
TFIID_NTD2
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Cytochrom_D1
Beta-prop_VPS8
WD40_like
PALB2_WD40
Beta-prop_RIG_1st
SpoVT_C
Motif
Other DBs
NCBI-GeneID:
123163720
NCBI-ProteinID:
XP_044437010
LinkDB
All DBs
Position
7D:complement(605560825..605577772)
Genome browser
AA seq
583 aa
AA seq
DB search
MGIQFSGPIQAFIHCFMDLVSEGHTLEARAFFLKFREDHELMHSRDLQKLEGTLSPLHLE
EMDLARSLRENKFRIKLCEYSYELLLQYLQKTQALVMLGIINERIIFEVSAGQPSLISDD
ADVVALVGTSKDLAKQINQKEVHWGLLEDSVEERMEKALSDSDRAEGESKDADAEDNNKK
KSSEGGKQGGPLNKKLKKDKLVGATGKNTKSETSMISAAPRVKPELTLPATPVEVEQSIL
EDLRNRAQLNNLALLSVSFYTFLNTHNGLNCSSISNDGSLVVGGLSDSSVKVWDMAKIGQ
PAKTSSSQGENGSSQDERLSSTSEGKRPYTLFQGHSGPVYSAAFSPFGDFLLSSSSDSTI
RLWSTKLNANLVCYKGHNYWDVQFSPVGHYFASASHDRTARIWSMDKIQPLRIMAGHLAD
VDCVQWHVNCNYIATGSSDKTVRLWDVQTGECIRMFIGHRSMVLSLAMSPDGRYMASGDE
DGTIMMWDLSTGSCVSPLAGHNSCVWSLAFSCEGALLASGSADCTVKLWDVASSTKALKM
DDTKAGSTNRLRLLKALPTKSTPVYNLRFSRRNLLFASGALSL
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgggcatacaattctctggaccaatacaagcgtttatccattgcttcatggatctagtg
tcagaggggcatacactagaagctcgggcatttttccttaaatttcgggaagatcatgaa
ctgatgcattcaagggatctccaaaagctggaaggcactctttctcctttgcatttggag
gaaatggatctggcccgatctttaagggaaaataaattcagaattaaattatgtgagtat
tcatatgaattacttctccagtatctccagaaaacacaagctcttgtgatgcttggaata
atcaatgaaaggataatttttgaagtgtccgctgggcagccttcattgatctctgatgat
gcggatgttgttgctctggttggaaccagcaaggacttggcaaaacagataaatcagaag
gaagtgcattgggggttgctggaagattcagttgaggagcgtatggagaaagcactctca
gattctgatagagctgaaggagaaagcaaggatgcagatgcagaagataataacaagaaa
aaatcctcagaaggtggaaagcagggtggtcctctgaacaaaaagctcaaaaaggataag
cttgtaggtgcaacagggaaaaataccaaatccgaaacaagcatgatttctgcggcacct
cgtgtaaaaccggagctaacccttccagcgacgcctgttgaagttgaacaatcaattctt
gaggacctgcggaaccgtgcacaattgaataacttggcattgttatctgttagcttctac
acattccttaatacacataacggattaaattgctcatcgatatcaaatgatggatctttg
gtagttggtgggttatcagactcatcagtaaaggtttgggatatggcaaagattggtcaa
ccagccaaaacatctagttcacaaggagagaatggatcttcacaggacgagcgcttgtca
tcaacatctgaggggaaaagaccgtatacattattccaaggtcattctggaccagtttat
tccgctgcctttagtccatttggagattttctcctgtcatcatcttcagattcaacaatt
cggctatggagtaccaagttgaatgccaatcttgtttgttacaaaggacacaattactgg
gatgtccaatttagtccagtcggccattattttgccagtgcctcgcatgacaggactgct
cgaatctggtcaatggataaaatccaacctttgcggataatggctgggcatcttgctgat
gttgattgtgtgcaatggcatgtaaactgtaactacattgccaccggctctagtgacaaa
actgtaaggctatgggatgttcaaactggtgaatgtatacggatgtttattggtcacagg
agtatggtcttgtcccttgcaatgtctcctgatggccgatacatggcctccggagatgaa
gatgggaccatcatgatgtgggatctctctactggtagctgtgtttcaccactggcagga
cacaactcttgtgtgtggtcacttgctttcagctgcgagggagcattgcttgcatctgga
tcggctgattgcactgttaaactctgggatgtcgcgtccagcacaaaggccctgaagatg
gatgacaccaaggctggttccacgaaccgactgaggctgctgaaagctctccctacaaaa
tcgactcctgtttataacttgcggttttctcggaggaatctattgtttgcgtctggcgct
ctctcgctatag
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integrated database retrieval system
