Triticum aestivum (bread wheat): 123164558
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Entry
123164558 CDS
T07757
Name
(RefSeq) zinc finger CCCH domain-containing protein 40
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123164558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123164558
Spliceosome [BR:
taes03041
]
Complex B
Other components
Prp19-related factors
123164558
Complex C
123164558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
zf-CCCH_12
zf-CCCH
zf-CCCH_3
RRM_YTH1
RRM_3
RRM_occluded
zf-CCCH_10
zf-CCCH_4
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
123164558
NCBI-ProteinID:
XP_044438023
LinkDB
All DBs
Position
7D:complement(84777327..84780966)
Genome browser
AA seq
497 aa
AA seq
DB search
MAHRLLRDAQADGWERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGR
DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPRSDVNREYFAE
EHDRKAAAGIDYDSSYGKARPNDTILKLQRTSPYYKRNRAHVCSFYVRGECTRGAECPYR
HEMPETGELSQQNIKDRYYGVNDPVALKLLGKAGEMPSLQPPDDETIRTLYIGGLDNRVS
EQDLRDQFYAHGEIESIRMVIQRACAFVTYTTREGAERAAEELANKLVIKGVRLKLMWGK
PQAPRPDDDEAGRQGHVSHGGLLPRAVISQQHSSDQPQPPGMEGQQQVAPQGSGYFNIPP
PPAVDQRMYPSMDPQRMGAVVRSQEGDGSKPGPQHAGQAQASSSSGQGYLMRPPLPPYYQ
GAQYPPYYPPPPYGGGYMAPPRMPYPPQYPPYRPMLAPPAQQPQGSSSQQPAPVPAGQQQ
AQAPPAQQQPPAAAAQN
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaccggctgctgcgggacgcgcaggccgacggctgggagcggtccgacttcccc
atcatctgcgagtcatgcctcggcgacaacccctacgtccgcatgctgagagctgaatat
gacaaggaatgcaagatctgtgcgcgtccttttaccgtcttccgttggagacctggtcgg
gatgcaaggtacaagaagacagagatctgccagacgtgctgcaagttgaaaaacgtctgc
caggtctgccttctggaccttgaatatggtctgccagttcaggttcgcgatactgcactc
gcgatcaattcgaatgatgcaattccaaggagtgatgttaaccgtgagtactttgcagaa
gagcatgatcgtaaggctgcagctggcatagattatgactcttcatatgggaaggcccgt
ccaaatgataccattctgaagcttcagaggacttcaccatattacaagaggaaccgagct
catgtttgcagtttctatgtgcggggtgaatgtacaagaggtgctgagtgcccatatcgc
cacgagatgcctgagacaggggagttatcccagcagaacatcaaagatcgctactatgga
gttaatgacccagtggctctcaagcttttgggtaaggcaggtgagatgccatctctgcag
ccaccagatgatgagactataaggaccctctacattggtggacttgataaccgagtcagt
gagcaggatttgagggatcagttttatgcacatggtgagattgaatccatcaggatggta
atccagcgtgcttgtgcatttgtcacatacacaacaagagaaggtgctgagagagctgca
gaggagctagctaacaagctggtcatcaagggtgtgcgcctgaagctcatgtggggcaag
cctcaagccccaaggccagatgatgacgaggctgggaggcaaggccatgtatcccatgga
ggattgctccctagggctgtcatatcccagcagcatagcagcgaccagcctcagccacct
gggatggagggccaacagcaagtggcaccacaaggatcaggctacttcaacattccacca
ccgccagcggtggatcagaggatgtacccttcaatggatccccagaggatgggcgctgta
gtcaggtcgcaggagggcgatggcagcaagccagggccacagcacgccgggcaagctcag
gcgtcaagcagctcaggacagggctatcttatgcgtccgccgctgccgccttactaccag
ggtgctcagtaccctccatactacccacccccaccatatggcggcggttacatggctccg
cctcgcatgccgtacccaccccaatatccaccataccggccaatgctggcgcccccagcg
cagcagccacaagggagttcatcccagcagccggcaccagtgccggcagggcagcagcag
gctcaagcacctcctgctcagcagcagccaccggcggcggcagcccagaactga
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integrated database retrieval system
