Triticum aestivum (bread wheat): 123164973
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Entry
123164973 CDS
T07757
Name
(RefSeq) U3 small nucleolar RNA-associated protein 21 homolog
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123164973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
taes03009
]
123164973
Ribosome biogenesis [BR:
taes03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
123164973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
EIF3I
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_EIPR1
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_WDR75_2nd
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_SCAP
VPS8_N
Beta-prop_NWD2_C
Nucleoporin_N
PROPPIN
Beta-prop_DCAF12
Utp12
Nbas_N
BCAS3_WD40
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
123164973
NCBI-ProteinID:
XP_044438535
UniProt:
A0A3B6TZ39
LinkDB
All DBs
Position
7D:complement(614038852..614046815)
Genome browser
AA seq
906 aa
AA seq
DB search
MGIFEPFRAIGYITTGGVPFSLQRLGTETFVTVSVGKAFHVYNCAKLTLVLAGPQLPKKI
RALASFKEYTFAAYGSDIAVFKRTDLVVTFTKHEEKVNMLYLFGEYILSADIKGDIFIWA
FRGAKPSNEPVGNISLGDKFTPTCIMHPDTYLNKVIIGSEEGPLQLWNISTKKKVYAFKG
WDSSVRCCVSSPALDMVAVGCSDGSIHVHNIRYDEELMSFNHEIRGAVTALSFRTDGQPL
LASGGSSGVISIWNLEKRRLHSVIREAHDGSIVSLHFFANEPILMSSAADNSIKMWIFDN
NEGDARLLRFRSGHSAPPRCIRFYGNGKSILSAGQDRAFRLFSVVQDQQSRELSQRHVAK
RAKKLRVKEEEIKLKPVIAFDCAEIRARDWCNVVTCHMDTSKAYVWRLQNFVIGEHILTP
SSETESPIKACTISACGNFTILGTEGGWIEKFNLQSGISRGSYIDGSLSLQCAHEGEVVG
LACDATNGSLISAGYRGDIKVWDFKSCKLKSKFNVGKSVTKIAYHRANGLLATVADDMVL
VLFDTVSMKMVRRFEGHTDRITDLCFSEDGKWLISSSMDGTLRIWDISLARQIDAMRVDV
SITSVSMSPNMDVLATTHVDQNGVYLWVNQALFSPSTNVDSYASGKHVRNVLLPTVSSAE
RSEEEEPIKKSQDSNQSNIKPFVIMDHQIPNMITLSLLPRSQWQSLTNLDIIKVRNKPIE
PPKKPEQAPFFLPSVPSLSGEILFEPPSSKETDGSTTEDIGHKKMADLSSHFSRLLQSCG
ELESYSAFTEYLKGLSPSSLDMELRMLQIIDDDEVEESEEPRPELQSISLLLDYFIHELS
CRNNFEFVQAVLKLFLKIHGETIRRHSTLQEKVRKLLDVQSKVWQKIDKMFQSSRCMVTF
LSNSQF
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggggatcttcgagccgttccgcgcgatcgggtacatcaccacgggcggcgtgcccttc
tccctgcagcgcctcggcaccgagaccttcgtcaccgtcagcgtcggcaaggccttccac
gtctacaactgtgccaagctcactttggtccttgccggacctcaactgcccaagaagatc
cgcgctctcgcgtccttcaaggaatacacctttgctgcatatggaagcgatatcgcggtt
ttcaaacggaccgatctggtggttacctttactaaacatgaagaaaaggtcaacatgttg
tacctgtttggagagtatattctcagtgcagatattaaaggtgatatatttatctgggcc
ttcagaggggcaaaaccaagcaatgagcctgttggaaacatatcactgggagacaagttt
actccaacctgcattatgcatccggatacttacctaaataaggtcattattggtagtgaa
gaaggacccttgcagctgtggaatatcagcacaaagaaaaaagtatatgcttttaagggt
tgggattcatcagtacgttgttgtgtttcttcacctgctctggatatggttgcagtcggt
tgctccgatggatcgattcatgttcacaatatacgatatgatgaagagttgatgtctttc
aaccatgaaattcggggtgctgtaactgccctgtcatttcgaacagatggtcaacccctt
ctagcatctggaggttcctcgggtgttattagcatttggaatcttgagaagagaaggctg
cactctgtgattagggaggcccatgatggttctattgtatcacttcatttttttgccaat
gaacctattttgatgagctcagcagctgataattcaataaaaatgtggatatttgataat
aatgaaggagatgctcgtctgttacgatttcgaagtgggcatagcgctccacctcggtgc
ataagattctatggcaatggaaaatccatcttatccgctggtcaagaccgtgccttccgt
cttttctcagttgttcaggatcaacaaagcagagagctttctcagcggcatgtggcaaaa
agagcaaaaaaacttagagtaaaggaggaagagataaagctaaaaccagttattgcattt
gattgtgctgagatacgtgcacgtgattggtgtaatgttgttacatgccacatggatact
tcaaaggcatatgtatggcgtcttcagaactttgttataggcgaacatattcttacacca
tcgtcagagactgagtcaccgattaaggcttgtactataagtgcatgtggtaattttact
atcttgggcactgaaggtggttggatcgaaaaatttaaccttcaatctgggattagtcgt
ggtagttacattgatggctcgctgtcattgcaatgtgcacatgaaggtgaagttgttgga
ttagcctgtgatgcaacaaatggatctctgattagtgctggataccgtggggatattaag
gtctgggattttaaaagttgcaagctaaaatccaaattcaatgttggtaaatctgtaact
aagattgcatatcaccgggcaaatggtcttcttgctactgtagcagatgatatggtgctt
gtattgtttgatacagtatcgatgaaaatggtccgtagatttgaaggacatacagatcgt
atcactgatctgtgtttcagtgaggatgggaaatggctcatttcgtctagtatggatggg
acgctcagaatatgggatatcagtttagcaagacagatagatgcaatgcgcgttgatgta
tctataacatccgtctctatgtctcctaatatggatgtgctggcaaccacccatgttgat
caaaatggcgtgtatctttgggttaatcaagctttgttctcaccttcgacaaatgttgat
agctatgcaagtggtaaacatgtccggaacgtgcttttgccaactgtttcatcagccgaa
agatctgaggaggaagaacccattaaaaaatcacaagattcaaatcaatctaatattaaa
ccttttgtcataatggatcatcaaataccaaatatgatcacactctcattactcccaagg
agtcaatggcaaagcttgacaaatcttgacattataaaggttcgaaacaaaccgatcgag
ccacctaagaaacctgagcaggcgccatttttcttgccctcagttccatccctttctggg
gagatattgtttgagcctccttccagtaaagaaacagacggcagcactactgaggacata
ggtcataaaaagatggctgatctctcctcccacttcagtcggctgttacaatcctgtgga
gaacttgagagctattcagcgttcaccgaatacctaaaaggcctatctccgtcatcttta
gatatggaactacggatgctacagataatagatgacgacgaggtggaagagtctgaggaa
ccaagacccgagctccagtccatctcattgctgctggactacttcattcatgagctttcc
tgcaggaacaacttcgagtttgttcaagctgttctgaaattgtttctgaagatacatggt
gaaacaatacggcgccactcgacgctacaggagaaagtgaggaaacttctagacgtccag
agcaaggtctggcagaagatcgacaaaatgtttcagagctcgcgatgcatggtcacattc
ctcagcaactcgcagttttag
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