Triticum aestivum (bread wheat): 123165299
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Entry
123165299 CDS
T07757
Name
(RefSeq) zinc finger CCCH domain-containing protein 45-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123165299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123165299
03019 Messenger RNA biogenesis [BR:
taes03019
]
123165299
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123165299
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123165299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
zf_CCCH_4
zf-CCCH
zf-CCCH_2
Torus
zf-CCCH_4
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
123165299
NCBI-ProteinID:
XP_044438859
UniProt:
A0A3B6TQU0
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All DBs
Position
7D:complement(571077328..571082224)
Genome browser
AA seq
650 aa
AA seq
DB search
MDDGDGGLSFDFEGGLDTGPAAGGLALSSADAGATGGGGGGDGGGHGRGRGRGSYRQTVC
RHWLRGLCMKGEACGFLHQFDKARMPVCRFFRDYGECREPDCAYKHSYDDVKECNMYKMG
FCPNGPNCRYKHVKLPGPPPPVEEVLAKILQMRSSNFNKFNQHRNNNYNQQGDRPRPPPG
SGLPNQNSTDNASTMQPAAGQQAQTMNQQPQQKQQQVQHQQKPNTNDQVQGVPNGSSNQP
TRLATPLPQGSSRYFIVKSCNRENLEISVQQGIWATQRSNEAKLNEAFESMDNVILIFSI
NRTRNFQGCAKMTSRIGGYIGGGNWKSANGTAHYGRNFSLQWLKLCELSFQKTHHLRNPY
NDNLPVKISRDCQELEPFIGEQLASLLYLEPDSELTAMLVAAEAKREEEKAKGVSADEAA
DNQDIVLFEDNEEEEEEESEEEEENNGQESQGRGRGRGMMWPPQMQMPRGPMMGPRGFPP
NMMGDFGGGFGFGMPDPFGMPRGFPPFGGPRFPGDFPRGPMPGMVFPGRPPQPGGMFPMG
LEMMMGPGRGPLMGMGGPGRPNRPIGMAPFMPPPPPRPVKRDQRRPGGDNRGDRYETGSD
QGSRGHDNNAGNSGADGNRSQSGDRFGRSAFRDDDSESDEEAAPRRSRKR
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggacgacggcgacggcggcctcagcttcgatttcgagggcggcctcgacacgggccca
gcggcgggcgggctagcgctgtcctcggccgacgccggcgcgaccggcggcggcggtggc
ggagatgggggcgggcacgggcgaggccgcgggcgcggcagctacaggcagacggtgtgc
cggcactggctgcgtgggctgtgcatgaagggcgaggcgtgcgggttcctccaccagttc
gacaaggcccgcatgcccgtgtgccgcttcttccgcgactacggcgagtgccgcgagccg
gattgcgcctacaagcactcctacgacgacgtcaaggagtgcaacatgtataagatggga
ttttgccctaacggcccaaattgtcggtacaagcatgtcaagttgcctggaccaccacct
cctgtcgaggaagttctcgcaaagattttgcagatgcgatcttccaatttcaacaagttt
aatcagcacaggaacaataattataatcagcagggggacaggcctcgacctccacctggt
tcaggcttacctaaccaaaattcgacagacaatgcttcaacaatgcaaccagctgccggg
caacaagctcaaacaatgaatcaacagccccaacagaagcagcagcaggtgcagcaccag
cagaagccaaatacaaacgaccaggttcaaggtgttccaaatggctcctctaatcaaccc
accagacttgcaacaccccttccacaagggtcatctaggtacttcattgttaagagttgc
aatcgggagaacctggaaatatcagttcagcagggaatctgggctactcaaaggagtaat
gaggctaaactaaatgaagcttttgaatccatggacaatgttattttaatattctcaatc
aatagaacacgtaatttccagggttgtgcaaagatgacttcgaggattggtggctacatt
ggtggcggaaactggaaatctgctaacggaacagcacattatggtcggaacttctcacta
cagtggcttaagctttgcgaattgtcatttcagaaaactcatcatcttcgcaacccatac
aatgacaatctccctgtcaagatcagtcgagattgccaggaattagaacctttcattggt
gagcaattggcttctctgctttatctggagccagatagcgaacttacggctatgctagtt
gcagcagaggccaagagagaagaggaaaaggcaaagggagtcagtgctgacgaagcagct
gacaaccaagatattgtgctgtttgaggacaatgaagaagaggaggaagaggaaagtgag
gaggaagaggaaaacaatggccaggaatcccagggaagggggcgtggaaggggaatgatg
tggccgcctcagatgcagatgccacgcggaccaatgatgggaccgcgcggcttccctccc
aacatgatgggcgattttggtggcggtttcggctttggcatgcccgatccgttcggcatg
ccgcgtggcttcccaccattcggtggcccaaggttccccggtgacttccccagaggtccc
atgcctggcatggtcttccccggaaggcctccgcagcccggtggcatgttccccatgggc
ctcgagatgatgatgggccctggccgagggccgctcatgggaatgggcgggcctgggcgg
ccgaaccgccccatcggcatggcccccttcatgccgccgccgccaccccgtcccgtgaaa
cgggaccagaggaggccgggcggtgacaacaggggtgacaggtacgagacagggtctgac
caggggagcagggggcatgacaacaacgccggcaactctggagcagacgggaacaggtcc
cagtccggggacaggttcggcaggagcgccttccgggacgacgacagtgagagcgacgag
gaggcggcgcccaggcggtcaaggaagcgatag
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